Gene Information

Name : Pnec_0490 (Pnec_0490)
Accession : YP_001797370.1
Strain : Polynucleobacter necessarius STIR1
Genome accession: NC_010531
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 435847 - 436572 bp
Length : 726 bp
Strand : +
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: pnu:Pnuc_1467 ABC transporter

DNA sequence : 
ATGAATAACTTAGTGCTCAAAGCCAGAGACCTTGCAAAAACGTATGGTCAGGGTCCTACAGCGGTTGAGGTTCTCAAAGC
AATTGATTTGGATGTGGCGCCCTCAGAAAAGCTTGCTATTGTTGGCTCTTCAGGTTCTGGCAAAAGCACTTTGCTGCACC
TCTTGGGCGGTTTAGATACTCCAAGTTCTGGTTCGGTAATTTTGGTCGGCTCTATTTTGAATAACTTATCAGTGAGGAAA
TTAGATCAGCTACGCAATCATAGTTTGGGTTTCATTTACCAGTTCCATCACCTCTTAGATGAATTTAGCGCTGCCGAGAA
TGTTGCGCTACCGCTGCGTATTCGTGGTTTAAGTAATGATGAGTCTATGGATCGCGCCAGTAAGATGCTGAAAGCGGTTG
GGCTATCAGCTCGAGAGCTACATACTCCTGGCGAGCTGTCGGGCGGAGAGCGTCAACGTGTTGCTGTTGCTCGTGCCTTG
GTCGGTAATCCCACTTGCGTTTTGGCGGATGAGCCAACCGGTAATCTTGATACTGAGACTGCTGATGGCGTATTTGATTT
GATGTTAAATATTGCTCGCGATCAAGGTACTGCGTTTGTGATTGTGACTCATGATCCTGTGCGCGCTAAACGTTGTGATC
GCATTTTGCATTTAGAGCGTGGAGTATTGAAAACATTTTCAGCGTGTGTGGACATCCCATGTGGATCGATACCCATTGCC
ATCTAG

Protein sequence : 
MNNLVLKARDLAKTYGQGPTAVEVLKAIDLDVAPSEKLAIVGSSGSGKSTLLHLLGGLDTPSSGSVILVGSILNNLSVRK
LDQLRNHSLGFIYQFHHLLDEFSAAENVALPLRIRGLSNDESMDRASKMLKAVGLSARELHTPGELSGGERQRVAVARAL
VGNPTCVLADEPTGNLDTETADGVFDLMLNIARDQGTAFVIVTHDPVRAKRCDRILHLERGVLKTFSACVDIPCGSIPIA
I

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-33 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnec_0490 YP_001797370.1 ABC transporter NC_008702.1.4606598. Protein 3e-35 44
Pnec_0490 YP_001797370.1 ABC transporter NC_012469.1.7686878. Protein 1e-37 43