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Name : Pnec_0432 (Pnec_0432) Accession : YP_001797320.1 Strain : Polynucleobacter necessarius STIR1 Genome accession: NC_010531 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 383138 - 384577 bp Length : 1440 bp Strand : + Note : KEGG: rso:RSc1311 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase DNA sequence : ATGGCTGAATTCCGTTCACGTTCCGTTACGCCCAATCCCGGCATAATGGGTTCTGGGGATGCAGTCGTGCAGGCTTTAAA AGTCCCGCCGCATTCTGTAGAAGCCGAGCAATCTTTGCTCGGTGGTCTACTGATCGATAACTCCGCTTGGGATAACCTGG GTGGCGTATTAAACGATAAAGATTTCTATCGCCCTGAACACGCCTTGATCTATAAGGTCATTGCTCGTTTGGTTGGTGAC AATCATCCCGCTGACGTTATTACTGTTCACGATGCAATTAAATCCGAACAAGGTGGCGATTTAGTTGGAATCGATTACTT AAATTCATTAGCGCAAAACACTCCAAGCGCGGCCAATATTAAAGGTTATGCCGACATTGTTCGTGACCGAAGTATTTTGC GTCGCTTGATTGAAGTTTCAGACAGTATTGTTAATTCTGCATTTATTCCAGAAGGGCGTACTGTTAGAACGCTTTTGGAT GAGGCTGAGTCCCGTATTTTGCAAATTGGTGAAGAGGGTAGTCGCAAAGCCGACTATCTTGAGATTGAGCCTTTGCTTAA GACTGTCGTAGCTCGTATTGATGAGCTCTACAACCGCCAAGGCGGGAGCGATATTACTGGTATTGCCACTGGCTTCTTAG ATTTGGATAAGCAAACTAGCGGTCTGCAAAAAGGCGACCTCGTGATTGTGGCTGGAAGACCTTCGATGGGGAAAACTGCA TTCGCATTGAACATTGCCGAGAATGTGGCTTTGGCAGAAGGCTTACCCGTTGTTGTTTTCTCTATGGAGATGTCGGGCGA ACAATTGGCTGCCCGTTTACTTGGATCCGTAGGTCGCGTAGACCAAGGTCGCATGCGTACTGGTAAGTTGCAAGATGATG AGTGGCCACGTGTTACCGATGCTATTGCGCGCTTAAGTAATACCCAAATTTTGATTGATGAGACTGGGTCTTTATCAAGC CTAGAACTCCGTGCACGCGCACGTCGAATTGCCAGAAACTTTGGCGGCACTCTCGGCTTGGTTGTGATCGACTACTTGCA GTTGATGAGTGGCTCTGGCTCAGAAAACCGTGCAACCGAGATTTCTGAAATCTCACGTTCACTTAAATCGCTCGCAAAAG AATTACAGTGTCCAGTGGTTGCACTCTCTCAGTTAAACCGCGGCCTTGAACAACGTCCTAATAAGCGTCCGATCATGTCT GACTTGCGTGAGTCAGGAGCTATCGAACAAGATGCCGACTTAATTATGTTTATTTATCGTGATGAAGTTTATCACCCAGA TACAACAACTGATAAAGGTGTGGCTGAGATCATCATTGGTAAGCAACGTAACGGCCCTATCGGCACAGTGCGCTTAAGCT GGCAAGGCCCGTATACCAAGTTTGATAACTTGGCGATGGGATCTATTGGTTATTCCTCTGGTGGTTACGAGCCGTTCTAA Protein sequence : MAEFRSRSVTPNPGIMGSGDAVVQALKVPPHSVEAEQSLLGGLLIDNSAWDNLGGVLNDKDFYRPEHALIYKVIARLVGD NHPADVITVHDAIKSEQGGDLVGIDYLNSLAQNTPSAANIKGYADIVRDRSILRRLIEVSDSIVNSAFIPEGRTVRTLLD EAESRILQIGEEGSRKADYLEIEPLLKTVVARIDELYNRQGGSDITGIATGFLDLDKQTSGLQKGDLVIVAGRPSMGKTA FALNIAENVALAEGLPVVVFSMEMSGEQLAARLLGSVGRVDQGRMRTGKLQDDEWPRVTDAIARLSNTQILIDETGSLSS LELRARARRIARNFGGTLGLVVIDYLQLMSGSGSENRATEISEISRSLKSLAKELQCPVVALSQLNRGLEQRPNKRPIMS DLRESGAIEQDADLIMFIYRDEVYHPDTTTDKGVAEIIIGKQRNGPIGTVRLSWQGPYTKFDNLAMGSIGYSSGGYEPF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 9e-98 | 51 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 6e-84 | 48 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-84 | 47 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-85 | 46 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-84 | 46 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-85 | 44 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-85 | 44 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 7e-81 | 44 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 9e-64 | 42 |
