Gene Information

Name : Pnec_0310 (Pnec_0310)
Accession : YP_001797217.1
Strain : Polynucleobacter necessarius STIR1
Genome accession: NC_010531
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 278362 - 279126 bp
Length : 765 bp
Strand : -
Note : KEGG: pnu:Pnuc_0282 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase

DNA sequence : 
ATGAACGCTGACTCTAAGGCTCCTGATTTTTTAGTAGTGATTCCAGCAAGGCTGGGATCTACTCGTCTGCCTCGTAAACC
ATTAGCGGATATTGGTGGTAAGCCAATGGTGATTCGGGTTGCTGAACGCGCCAAGCAATCACTCGCGCATAGTGTTGTCG
TAGCAACTGACTCTCCAGAAATACAAGCAGCTTGCGATGAGCATCGTATTGAGTGTTTACTCACCAGCGAGAATCATCCG
ACAGGCACCGATCGCATTGCAGAAGTTGCGCAATTATTGAAACTCCCAGCCAATGCTTTAGTTGTCAATGTACAAGGTGA
TGAGCCACTCATTCCACCAAAACTCATTAATCAAGTTGCCCGCACCTTGGCCGAGCACGAGCAGTGCGTAATCTCTACGG
TTGCCGTTCCGATTACAGATGCAGCAGAGATTAATAACCCAAACGTGGTGAAAGTGGTTCTGAACCGTTCCGGGGAGGCT
CTCTACTTTTCAAGGGCGCCAATCCCTTTTGTGAGAGACCCACAGTCCAGTCAAAAAACTATGCATTTACGCCACCTTGG
GATCTACGCCTATCGAGCTGACTTTTTACAGGCCTATACCCGCTTAGAGCCCGCCTCACCTGAGCAAGCAGAAGCACTAG
AGCAATTGCGCGCCCTGTGGAACGGCTACCGCATAGCGGTACATACCGCTCCTGAAGCCCCGCCAGCCGGTGTAGACACC
CCTGAAGACCTCGAAAGAGTGCGGCAGCTTCTGGCTCGCTCCTAG

Protein sequence : 
MNADSKAPDFLVVIPARLGSTRLPRKPLADIGGKPMVIRVAERAKQSLAHSVVVATDSPEIQAACDEHRIECLLTSENHP
TGTDRIAEVAQLLKLPANALVVNVQGDEPLIPPKLINQVARTLAEHEQCVISTVAVPITDAAEINNPNVVKVVLNRSGEA
LYFSRAPIPFVRDPQSSQKTMHLRHLGIYAYRADFLQAYTRLEPASPEQAEALEQLRALWNGYRIAVHTAPEAPPAGVDT
PEDLERVRQLLARS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 7e-38 44
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 6e-38 44
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 9e-38 44