Gene Information

Name : Pnec_0235 (Pnec_0235)
Accession : YP_001797146.1
Strain : Polynucleobacter necessarius STIR1
Genome accession: NC_010531
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 213767 - 214501 bp
Length : 735 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pnu:Pnuc_0214 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGGGCGATAGATTAAAAGACAAAGTAGCCATCATCACCGGCGCCGCTAAAGGCATAGGCTTTGCTACAGCCCAGCGTTT
TGCGCAAGAGGGTGCTAAGGTCATCATTACCGATATCAATCAAGATGCCGTCAACGGTGCGGTTGCACAAATTCCTAATG
CTGAGGGTTGCGCAATGAATGTCACTGATCGCGCGAGCATTCAGGCGGTGGTTGATCAGGTGATACAAAAACACGGACGT
ATTGATATCTTGATTAATAACGCTGGCATTACACAAGATGCCCGTTTAATTAAGAGGACTGAGGCCCAGTTTGATACCGT
GATTAATGTCAATTTAAAGGGAGTCTTTAATTGCACTCAATTGATCGTGCCGCATATGCTCGAGGCTGGTTCTGGTGCAG
TAGTCAATGCATCTAGCGTTGTAGGTCTGTACGGTAATTTTGGTCAAACCAATTACTCGGCCACCAAATTTGGTGTCATT
GGCTTTATTAAAACCTGGGCGCGTGAATTGGGTCCCAAAGGTATTCGTGTCAATGCGGTATGCCCCGGTTTTATCGCCAC
AGAAATGGTGAAAGCTCTGCCAGAAAATATTTTGCAAGATATTGAAAAGCGTAGTTGGCTTGGCCGTCTTGGTACGCCTA
ACGAAATGGCTAATGTGTATTTATTCTTAGCTAGCGATGAGGCGAGCTATGTCAATGGGGTGACATTAGAGGCCAGCGGC
GGGATCTCCCTCTAA

Protein sequence : 
MGDRLKDKVAIITGAAKGIGFATAQRFAQEGAKVIITDINQDAVNGAVAQIPNAEGCAMNVTDRASIQAVVDQVIQKHGR
IDILINNAGITQDARLIKRTEAQFDTVINVNLKGVFNCTQLIVPHMLEAGSGAVVNASSVVGLYGNFGQTNYSATKFGVI
GFIKTWARELGPKGIRVNAVCPGFIATEMVKALPENILQDIEKRSWLGRLGTPNEMANVYLFLASDEASYVNGVTLEASG
GISL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 1e-32 44
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-32 44
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 7e-33 44
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 5e-33 44
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 2e-33 44