Gene Information

Name : Pnec_1608 (Pnec_1608)
Accession : YP_001798296.1
Strain : Polynucleobacter necessarius STIR1
Genome accession: NC_010531
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1410075 - 1410530 bp
Length : 456 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: pnu:Pnuc_1903 single-strand binding protein

DNA sequence :
ATGGCTTCGGTAAATAAGGTCATCATCGTAGGTAACGTAGGACGTGATCCAGAAACTCGTTACATGCCAAGTGGCGATGC
CGTTACAAACATTTCAGTAGCGACATCTGATCGCTATAAAGACAAGCAAACTGGCGAAATGAAAGAAACCACAGAATGGC
ACCGTGTTGCATTCTTTGGTAAGCTTGCAGAAATCGCTGGTCAGTATCTCAAAAAAGGTTCACAGGTTTATGTTGAAGGC
CGTTTGCGTACTCGCAAATGGACTGATGCTAGCGGCCAAGAAAAGTATTCCACAGAGATCGTTGCAGAAACAATGCAAAT
GCTTGGTGGCAAGCCAGTTGGCGGAAGTGCTGACGGTGGCGAAAGCTATGCACGCTCAAAGCCGGCTGAGCAGTCTGCCC
TAGTAGCCTCCAATGCGGCATCACTAGGCGCAATGGATGACGATATTCCGTTTTAA

Protein sequence :
MASVNKVIIVGNVGRDPETRYMPSGDAVTNISVATSDRYKDKQTGEMKETTEWHRVAFFGKLAEIAGQYLKKGSQVYVEG
RLRTRKWTDASGQEKYSTEIVAETMQMLGGKPVGGSADGGESYARSKPAEQSALVASNAASLGAMDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 9e-37 54
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 3e-29 49