Gene Information

Name : Pnec_1291 (Pnec_1291)
Accession : YP_001798030.1
Strain : Polynucleobacter necessarius STIR1
Genome accession: NC_010531
Putative virulence/resistance : Unknown
Product : AMP-dependent synthetase and ligase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG0318
EC number : -
Position : 1118054 - 1119706 bp
Length : 1653 bp
Strand : -
Note : PFAM: AMP-dependent synthetase and ligase; KEGG: pnu:Pnuc_0511 AMP-dependent synthetase and ligase

DNA sequence :
ATGGCAAATATTTATGAACAAGGCTTGGATCGCAATCCTGCTAACTACACCCCAATTACTCCACTCTTATTCTTAGAGCG
TTCAGCGGAAATTTATCCGAATAAAACAGCCATTATTCATGGCAAGTTACGCCAGACCTGGAGTCAAACCTATGAGCGTT
GCCGCCGCCTAGCGAGCGCTTTGCAAAAACACGGCATTGGCTTGGGTGATACGGTAGCTGTGATGCTGCCAAATACCCCT
CCTATGGTAGAGGTGCACTTCGGAATTCCAATGGCAGGCGCTGTATTAAATGCTCTTAATACCCGCTTGGATGCCGAATC
TATAGCATTTATGCTCAACCATGGTGAGGCAAAAGTGGTTATCGTGGATCCTGAGTTTTCGGTTGTTATGAAAAAGGCTC
TTGAGATTGCAAAGAAAGATTCAGGCCGTGAATTTTTGGTAATCGATGTAGGGGAAAAAGAGTTTGATGTTCCTGGTGAG
AAGTTAGGCAAGTTGACTTATGAACAGTTTCTTTCTGAGGGTGATCCTAGTTTTGCGTGGCAAGTTCCTGCAGATGAATG
GCAAGCGATTTGCTTGAACTACACCTCTGGTACAACTGGTAATCCTAAGGGAGTTGTGTATCACCATCGTGGTGCCGCTA
TTAATGCGGTGTCGAATGTCTTAGACTGGGATATCAATAAGCACCCTGTGTACTTATGGACATTACCGATGTTCCACTGC
AATGGCTGGTGTTTCCCATGGACGATTGCTGCTCGCGCCGGTGTAAATGTGTGTTTGCGTCGGGTTGATGCGCAGCATAT
TTTTGCAGCTATTAAAGAGCATGGCGTAACCCACTACTGCGCGGCTCCTATTGTCCATAACCTTTTGGTCAATGCGCCTG
ATGAGCTAAAGGCTGGTGTTCCTACAGGCGTCAAAGGCTTGATTGCAGGTGCTGCGCCACCTGCATCCATTATTGAGGGT
ATGGAAAAGCTAGGCTTCGATTTAACTCATGTTTATGGGTTAACTGAGGTTTATGGTCCTGCTTCTGTGTGCGTTAAGCA
AGACGAGTGGAATGATTTGGATATTGGCAAGCGCGCTCGTTTAAATGCTCGTCAAGGTGTACGCTACCACATGCAACAAG
CAATCGCAGTTTTGGATCCTGAGACGATGAAACCAGTTCCAGCTGATGGTGAAACCATGGGCGAAATTATGTTCAAGGGC
AACATCGCCATGAAGGGTTACCTGAAGAACGAGAAGGCCACTCAAGAAGCGTTTGAAGGTGGTTGGTTCCACTCGGGCGA
CTTAGCTGTGATGAATCCCGATGGCTATGTCAAGATGAAAGACCGCAGCAAAGATATCATCATCTCTGGCGGGGAAAATA
TTTCTTCTGTTGAGGTGGAGGATGTGCTGTATCGCCATCCCGCAGTGAACGCCGCTGCGGTTGTTGCCAAGCCTGATCCA
AAGTGGGGTGAAACCCCTTGCGCCTTCCTGGAAATTAAGCCTGGTTCAGACGTAACCCCAGAAGAAATCATTGCCCATTG
CAAGCAGCATTTGGCTGGTTTTAAGGTGCCTAGGGCGATTGTGTTCTGTGAACTTCCTAAGACCTCAACTGGCAAGATTC
AGAAGTTTGAGTTGCGCAAGCAGGCTGGATCTGCCACCGCTATTGATGTCTAG

Protein sequence :
MANIYEQGLDRNPANYTPITPLLFLERSAEIYPNKTAIIHGKLRQTWSQTYERCRRLASALQKHGIGLGDTVAVMLPNTP
PMVEVHFGIPMAGAVLNALNTRLDAESIAFMLNHGEAKVVIVDPEFSVVMKKALEIAKKDSGREFLVIDVGEKEFDVPGE
KLGKLTYEQFLSEGDPSFAWQVPADEWQAICLNYTSGTTGNPKGVVYHHRGAAINAVSNVLDWDINKHPVYLWTLPMFHC
NGWCFPWTIAARAGVNVCLRRVDAQHIFAAIKEHGVTHYCAAPIVHNLLVNAPDELKAGVPTGVKGLIAGAAPPASIIEG
MEKLGFDLTHVYGLTEVYGPASVCVKQDEWNDLDIGKRARLNARQGVRYHMQQAIAVLDPETMKPVPADGETMGEIMFKG
NIAMKGYLKNEKATQEAFEGGWFHSGDLAVMNPDGYVKMKDRSKDIIISGGENISSVEVEDVLYRHPAVNAAAVVAKPDP
KWGETPCAFLEIKPGSDVTPEEIIAHCKQHLAGFKVPRAIVFCELPKTSTGKIQKFELRKQAGSATAIDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01500.1 AMP-binding protein domain Not tested PAGI-1 Protein 2e-123 49