Gene Information

Name : Pnec_1200 (Pnec_1200)
Accession : YP_001797959.1
Strain : Polynucleobacter necessarius STIR1
Genome accession: NC_010531
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 1037451 - 1038416 bp
Length : 966 bp
Strand : -
Note : KEGG: pnu:Pnuc_0656 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase

DNA sequence : 
ATGTCCCAAACCCTGAATTCTTCTCCCCAATCCGCCCCCAAACGCCTAGTAATTGCCTCCCGTGAAAGTCGTTTGGCCAT
GTGGCAGGCTGAGCACGTCCAAGATTGCCTTAAAAAGCTCTATCCGGACTGTGATGTCCAAATCTTGGGGATGACTACTC
GCGGTGACCAAATATTGGATAGAGCCCTCTCAAAAGTGGGTGGTAAAGGCCTTTTTGTAAAAGAGCTTGAAACAGCCCTT
GAGGATGGTCGGGCTGATTTAGCAGTGCATTCCTTAAAAGATGTCCCCATGGTGATGCCAGAGGGGTTTGATCTTGCCTG
CGTCATGGCCAGAGAGGATGCAAGGGATGCGTTTGTTTCAAATGATTACGCTAGCCTTGAGGATCTTCCGATCGGAGCAA
TTGTGGGTACCTCTAGCTTGCGACGGGAATCGGTTTTGCGTGCCAAGTTTCCTCATCTCGTGATTCAGCCTTTACGCGGT
AATTTGGATACCCGTATGGGTAAATTGGATAAAGGTGAGTACCAGGCGATTATTTTGGCTGCTGCTGGTTTAAAGCGCTT
AGGTTTAGAGTCACGCATACGAGCATTCTTGCCATACGATCCTTATACGCCAGCTGCAGGGCAGGGCGCCCTAGGAATCG
AAACCTTGAGTAAACATCCCAATATTAAGCAATGGCTCGCGCCATTAAATGATTTGCCTACATTGTTCGCTGTTTCAGCT
GAACGCATGGTGTCACGTCAGCTAGGAGGGTCTTGTGAAGTGCCGCTCGCTGCACACGCTGTACGGGATCAAAATCAAAT
GCAGATTCGCTCTTTTGTTGCGAGCACTGATGGCAAAGCAATTTGCTTGGCTCATGGCAGCGCATTAGTTGAGTCGGTCG
AAGATGCAGAAGCATTGGGTCTTGCGGTCGCGCAAGATTTGCTCTCACAGGGCGCGGCAGATTTAATTCCTGCACTACCA
AAATAA

Protein sequence : 
MSQTLNSSPQSAPKRLVIASRESRLAMWQAEHVQDCLKKLYPDCDVQILGMTTRGDQILDRALSKVGGKGLFVKELETAL
EDGRADLAVHSLKDVPMVMPEGFDLACVMAREDARDAFVSNDYASLEDLPIGAIVGTSSLRRESVLRAKFPHLVIQPLRG
NLDTRMGKLDKGEYQAIILAAAGLKRLGLESRIRAFLPYDPYTPAAGQGALGIETLSKHPNIKQWLAPLNDLPTLFAVSA
ERMVSRQLGGSCEVPLAAHAVRDQNQMQIRSFVASTDGKAICLAHGSALVESVEDAEALGLAVAQDLLSQGAADLIPALP
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-59 51
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-59 51