Gene Information

Name : Pnec_1082 (Pnec_1082)
Accession : YP_001797870.1
Strain : Polynucleobacter necessarius STIR1
Genome accession: NC_010531
Putative virulence/resistance : Unknown
Product : peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1686
EC number : -
Position : 938946 - 939962 bp
Length : 1017 bp
Strand : -
Note : PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: pnu:Pnuc_0739 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1

DNA sequence : 
ATGCGTTTGAATCGATTTTGGCTCTTTGCCTTGGCAGTATTACTTGCGGTTTGCACTTCGGTGAATGCACCCGCAATTGC
TGCAAATAAAGATAAACAGCAAGCCAAAACCAGTGCTAAGGCAACAACTAAGACCAGTACTAAAGCCAGCAAGAAGCCCA
AAACAGTTCGCGTAACTGTAACGCGCTCGACAGAGCCCGTTGTTCCTGCCAGACCATCTCTTGCTACCGCATTAGGATTG
CGCGAACAGCATGATAAACTCAATCTGAAATCTAGCGTAGCAATGGTTGTCAATCAAGATACTAAAGAGGTGTATTTTGA
AAAAAATCCTTCAGTCAGTCTGCCCATTGCTTCCATTACGAAGTTAATGACAGCAATGGTGGTTTTAGATTCAAAACTGC
CTTTAGATGAAGCTATTGTGATTAACGCTGATGATATACATATTTATCGTACTTCCCGTTTGGCTGGCGGCACTGTTTTA
ACGCGCGAAGAGGCTTTATTGCTAGCGTTAATGTCCTCTGAGAATCGCGCTGCATATACCTTGGGAAGAAATTACCCGGG
CGGCATTCCTGCATTTGTGGATGCTATGAACCGTAAGGCAAAAGAGTTGGGTATGAATCATTCTCACTTTGCGGATCCCA
CTGGCCTCATGAGTGAAAACGTTGCTACTGCAGAAGATCTTACGCGCATGCTCAACGCCGCCTATCAATACAAAATGATC
CGTGAGTTTTCAACATGGCCAGATTTAACAATGGTTATTGCAAAACGCCCACAGAAGTTTTTGAATACTAATCGCTTAGT
GCGTTCTGGCGATATGAATATTGGACTGCAGAAAACAGGCTTTATTAACGCCGCTGGTAAATGTTTGGTAATGCAAGCGA
GAGTTAACAACACCCCATTGTTATTGGTCTTCTTAGATTCTGTTGGCACGCAGTCCCGATTTGCTGATGCTGTGCGTGTG
CGTGATTGGTATGAGCGTATGCCTCCTGGAGCACAGCCAATTCGCCGCTTAATGTAA

Protein sequence : 
MRLNRFWLFALAVLLAVCTSVNAPAIAANKDKQQAKTSAKATTKTSTKASKKPKTVRVTVTRSTEPVVPARPSLATALGL
REQHDKLNLKSSVAMVVNQDTKEVYFEKNPSVSLPIASITKLMTAMVVLDSKLPLDEAIVINADDIHIYRTSRLAGGTVL
TREEALLLALMSSENRAAYTLGRNYPGGIPAFVDAMNRKAKELGMNHSHFADPTGLMSENVATAEDLTRMLNAAYQYKMI
REFSTWPDLTMVIAKRPQKFLNTNRLVRSGDMNIGLQKTGFINAAGKCLVMQARVNNTPLLLVFLDSVGTQSRFADAVRV
RDWYERMPPGAQPIRRLM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00303 YP_008207768.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR25 Protein 9e-38 45
BJAB0868_00307 YP_008211633.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR26 Protein 9e-38 45