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Name : fliP (RALTA_B0361) Accession : YP_001796794.1 Strain : Genome accession: NC_010530 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein flip Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 401015 - 401839 bp Length : 825 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGACTTTCCCGCGTGCCACGCTGTGGCGACCGCTGCCGCGCCCTGCCGGCGCCGCGCGCCCGGCTCCGTTGTTGTCCTC GCCGCTGCTGTCCCTGCTGGCGCTGACGCTGGCCATTGCCGCGCTGGCGCCCGCGCCGGCCTGGGCCCAGGCGCTGCCCG GCGTCATCAGCAAGCCCGCCCCCGGCGGCGGCCAGATCTGGTCGTTGCCGGTGCAGACGCTGGTGTTGCTGACCTCGCTG TCGTTCCTGCCCGCGGCGATGCTGATGATGACCGGCTTCACCCGCGTCATCATCGTGCTGGGGCTGCTGCGCAACGCGCT AGGCACGGCCACCTCGCCGCCCAACCAGGTGCTGGTGGGCCTGTCGCTGTTCCTGACCTTCTTCGTGATGGCGCCGGTGT TCGACCGCGTCTACAACGACGCCTACAAGCCGCTGTCCGAAAACAAGCTCAGCCTCGAAGCCGCCGCGGCCAAGGCCGCC GAGCCGCTCAAGGCCTTCATGCTGCGCCAGACCCGCGAGAAGGACCTGGCCATGTTCGCGCAGATGGCCAAGGCCCCGGA GATGCAGGGACCGGAGGAAGTGCCGCTCAGCATCCTGGTGCCCGCCTTCGTCACCAGCGAGCTGAAGACCGCGTTCCAGA TCGGCTTCACCATCTTCATCCCGTTCCTGATCATCGACCTGGTCGTGGCCAGCGTGCTGATGGCGATGGGCATGATGATG GTGCCGCCGGCCACCATCTCGCTGCCGTTCAAGCTGATGCTGTTCGTGCTGGTCGACGGCTGGCAGCTGCTGCTGGGTTC GCTGGCGCAGAGCTTCATGAACTGA Protein sequence : MTFPRATLWRPLPRPAGAARPAPLLSSPLLSLLALTLAIAALAPAPAWAQALPGVISKPAPGGGQIWSLPVQTLVLLTSL SFLPAAMLMMTGFTRVIIVLGLLRNALGTATSPPNQVLVGLSLFLTFFVMAPVFDRVYNDAYKPLSENKLSLEAAAAKAA EPLKAFMLRQTREKDLAMFAQMAKAPEMQGPEEVPLSILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMAMGMMM VPPATISLPFKLMLFVLVDGWQLLLGSLAQSFMN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 7e-24 | 44 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 7e-24 | 44 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 7e-24 | 44 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 8e-27 | 42 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 3e-27 | 42 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 3e-27 | 42 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 2e-27 | 42 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 4e-25 | 41 |
| hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 4e-16 | 41 |
| hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 4e-16 | 41 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 9e-27 | 41 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 9e-27 | 41 |
| hrcR | NP_791222.3 | type III secretion protein HrcR | Virulence | Hrp PAI | Protein | 2e-16 | 41 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 1e-16 | 41 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 1e-16 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_001796794.1 | flagellar biosynthesis protein flip | VFG2338 | Protein | 1e-73 | 76 |
| fliP | YP_001796794.1 | flagellar biosynthesis protein flip | VFG2494 | Protein | 7e-71 | 75 |
| fliP | YP_001796794.1 | flagellar biosynthesis protein flip | VFG1259 | Protein | 5e-56 | 60 |
| fliP | YP_001796794.1 | flagellar biosynthesis protein flip | VFG2016 | Protein | 9e-52 | 54 |
| fliP | YP_001796794.1 | flagellar biosynthesis protein flip | VFG0188 | Protein | 6e-28 | 43 |
| fliP | YP_001796794.1 | flagellar biosynthesis protein flip | VFG0519 | Protein | 1e-27 | 42 |
| fliP | YP_001796794.1 | flagellar biosynthesis protein flip | VFG0044 | Protein | 1e-27 | 41 |
