Gene Information

Name : RALTA_B1688 (RALTA_B1688)
Accession : YP_002008334.1
Strain :
Genome accession: NC_010530
Putative virulence/resistance : Virulence
Product : ATP-dependent protease
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1814286 - 1817075 bp
Length : 2790 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type f : factor

DNA sequence :
ATGCCGACCCTATGTGAAATCTGCAGTGCGCGCCCGGCCGTGGCGCGCGTCACGGTGGTTCAGGACGGCCAGCGCAAGTC
CATGTCCATTTGCGACTACGACTACCGGCAGCTGCTGCGCCACCAGGACATGCTCAACCCGTTCGATTCGCTGCTGGGCG
GGGGCGGCCTGTCCCGCTTCTTCGGCGGCCTCGGCAATGGCGCGGACGACGAGGCGCAGGGCGGCTTCGCCGCCGAAGTG
CCACGCGAATCCGTCGACGTGACCGACGCCTTCAGCGAACAGACGCTGGAGCTGCTGCAGCGCGCGGCGGAAAAGGCCCA
TGAGCTGCGGCGCAATGAACTGGACACCGAGCACCTGCTCTATGTGCTGTCCGATACCGATGTCTGCGTGGCACTGCTCA
AGGAGCTCAAGCTATCGCCGCAAGACCTGCGCGGCTATATCGACGCGCATGCGCAAACCGGCAGCGCCGCGCCGGACGCC
GCGGTCGACCGGATGACGATCTCGCCGCGCCTGAAGAAGGCGTTCCAGTATGCGTTCCAGGCGTCGCGCGAGCTGGGGCA
TTCCTATGTTGGCCCGGAGCACCTGCTGATCGGGCTCGCCTCGGTGCCCGACAGTATCGCCGGGACGCTGCTGAAGAAGT
ACGGCGTCACGCCTGAGGCGCTGCGCCAGAAGGTGGTGAAGGTGGTGGGCAAGGGCGCGGAGGATGGCCGCGTCGACACG
CCGACGGGCACGCCCACGCTCGACAAGTTCGGACGCGACCTGACCGCGATCGCGCGGCAGGGCAAGCTCGACCCGGTGCT
GGGCCGGGCGCAGGAGATCGAGAACACGATCGAGGTGCTGGCGCGGCGCAAAAAGAATAACCCGGTGCTGATCGGGGAGC
CCGGCGTGGGCAAGACCGCGATCGTGGAAGGGCTGGCGCAGCGCATCGTCAACGGCGACGTGCCGGAGGTGCTGCGCGGC
AAACGCCTGGTCGAGATCAACCTCAATGCCATGGTGGCGGGGGCGAAGTACCGCGGCGAGTTCGAGGAACGTGCCAAGCA
GCTGATCGATGAGGTCACCGCCCGGAACGATGAACTGATCCTGTTCATCGACGAGCTGCACACCATCGTCGGGGCCGGAC
AGGGCGGCGGCGAGGGCGGCCTGGACGTTGCCAACGTGCTCAAGCCCGCGCTGGCGCGCGGCGAACTGAGCCTGATCGGC
GCGACCACGCTGAACGAGTACCAGAAGTACATCGAGAAAGACGCGGCGCTGGAACGGCGCTTCCAGCCGGTGCTGGTGCC
CGAGCCCACCGTGGAGCAGACCATCGTCATCCTGCGCGGCCTGCGCGACAAGCTCGAGGCGCACCACCAGGTCACCTTTG
CCGACGATGCATTCGTGGCCGCGGCAGAAATGTCGGACCGCTACATCACATCGCGCTTCCTGCCGGACAAGGCCATCGAC
CTGATCGACCAGGCCGCGGCGCGCGTGCGCATCGGCGCGACCTCGCGGCCCGCCGACATCCAGGAACTGGAGGCGGAGAT
CGCGCAGCTCAAGCGCGAGCAGGACTATGCCGCGTCGCGCAAGCGCTTTGACGAGGCCAAGGCCTTCGAGGACCGCATCA
CCGGCAAGCAAAAGCGGCTCGATGAGCTGACGGAGGCATGGCAGCGCAAGACCGGCTCGGAAACACTGGAAGTCACGGTC
GCGGCCATTGCCGAGGTGGTGTCGCGGCTGACCGGCATCCCGGTGACCGATCTCACGCAAGAGGAACGCCAGAAGCTGCT
GAAGATGGAAGAGCGGCTGCGCGAGCGCATCGTGGGGCAGGATGACGCGGTGGTCGCGGTGAGCGACGCGGTGCGCCTGT
CGCGCGCGGGGCTCGGCCAGGCCAACCGGCCGATCGCGACCTTTCTCTTCCTCGGGCCGACTGGCGTGGGCAAGACCGAG
CTGGCCAAGGCGCTCGCGGAATCCGTGTTCGGCGACGAACAGGCCATCATCCGTATCGACATGTCCGAGTACATGGAGCG
CCATGCGGTGGCACGTCTGATTGGCGCGCCGCCGGGCTATGTCGGCTACGACGAGGGCGGGCAGCTGACCGAGCGGGTCC
GCCGCCAGCCCTATAGCGTGATCCTGCTGGACGAGATCGAGAAGGCCCACCCCGACGTGTACAACGTGCTGCTGCAGGTC
TTCGACGACGGTCGCCTGACCGACGGCAAGGGCCGCGTGGTGGATTTCAGCAACACCGTCATCATCGCCACGAGCAACCT
GGGCGCCCCGATCATCATGGAGAACCTGGAGAAGTCAGAGGCATCCCGCATGGATGACAAGGCGCTGCGCGAAGCGCTGA
TGAAGGTGCTGAAGGGACACTTCCGGCCCGAGTTTCTCAATCGCATCGATGACATCATCGTGTTCCACGCGCTTTCGCGC
GAGAACATCCGCGCGATCGTGCAGATCCAGCTCGAGCGCGTCGCGCGCACTGCCGCCGCGCAGGATATTGCGGTCAGGTT
CGATGCGGCGCTGATCGATCATCTGGTCGAGGTGGGCTACCAGCCGGAGTTCGGTGCGCGCGAGCTGCGGCGCCAGATCC
GCCAGCAGGTCGAAACCGCGCTGGCGCGGCAGATACTGGGCGACAAGCTGAAATCCGGGGACAGTGTCGAGGTGGGCTTC
GACCAGGAGCGCGAGGCGGCGACCTTCAGGAAGCTGGAAGCGGCGCGCAAGCCGAAGGCCGGCAAGGCGAGTGCCAAGGC
TGCTGCGCCCGGCAAGGGGGATGGCGGTAAGGGGGATGGCGCCGTTGCTGCCGGTGATGCCGCAGCCTGA

Protein sequence :
MPTLCEICSARPAVARVTVVQDGQRKSMSICDYDYRQLLRHQDMLNPFDSLLGGGGLSRFFGGLGNGADDEAQGGFAAEV
PRESVDVTDAFSEQTLELLQRAAEKAHELRRNELDTEHLLYVLSDTDVCVALLKELKLSPQDLRGYIDAHAQTGSAAPDA
AVDRMTISPRLKKAFQYAFQASRELGHSYVGPEHLLIGLASVPDSIAGTLLKKYGVTPEALRQKVVKVVGKGAEDGRVDT
PTGTPTLDKFGRDLTAIARQGKLDPVLGRAQEIENTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEVLRG
KRLVEINLNAMVAGAKYRGEFEERAKQLIDEVTARNDELILFIDELHTIVGAGQGGGEGGLDVANVLKPALARGELSLIG
ATTLNEYQKYIEKDAALERRFQPVLVPEPTVEQTIVILRGLRDKLEAHHQVTFADDAFVAAAEMSDRYITSRFLPDKAID
LIDQAAARVRIGATSRPADIQELEAEIAQLKREQDYAASRKRFDEAKAFEDRITGKQKRLDELTEAWQRKTGSETLEVTV
AAIAEVVSRLTGIPVTDLTQEERQKLLKMEERLRERIVGQDDAVVAVSDAVRLSRAGLGQANRPIATFLFLGPTGVGKTE
LAKALAESVFGDEQAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRQPYSVILLDEIEKAHPDVYNVLLQV
FDDGRLTDGKGRVVDFSNTVIIATSNLGAPIIMENLEKSEASRMDDKALREALMKVLKGHFRPEFLNRIDDIIVFHALSR
ENIRAIVQIQLERVARTAAAQDIAVRFDAALIDHLVEVGYQPEFGARELRRQIRQQVETALARQILGDKLKSGDSVEVGF
DQEREAATFRKLEAARKPKAGKASAKAAAPGKGDGGKGDGAVAAGDAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-164 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RALTA_B1688 YP_002008334.1 ATP-dependent protease VFG0079 Protein 0.0 51