Gene Information

Name : RALTA_B1150 (RALTA_B1150)
Accession : YP_002007810.1
Strain :
Genome accession: NC_010530
Putative virulence/resistance : Virulence
Product : response regulator, ompr family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1206809 - 1207483 bp
Length : 675 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : regulator

DNA sequence :
ATGCGCATCTTGCTGGTCGAAGACGAAGCCACCCTTGCCGCGCAGGTCCGGGCGAGCCTGGCCGACGCCGGCTACGCCGT
CGACACTGCCGCCGACGGCCTGGACGCCTGGCACCTGGGCGCGGAAGAGCCCTATGACGCTGTCATCCTCGACCTGGGCC
TGCCGCGGCTGGATGGGCTCTCGGTGCTGCGCCGCTGGCGCGCCGCGCAGGTGAATGCGCCGGTGCTGATCCTGACCGCG
CGCGACAGCTGGACCGAGAAGGTCGAAGGCATCGATGCGGGCGCCGACGACTACCTGTCCAAGCCGTTCCGCATGGAAGA
GCTGCTGGCGCGCATCCGCGCACTGATCCGGCGCGCGCACGGCATGCCCGCGCCCGAGCTGCAGTGTGGCCCGGTCCGGA
TGAATCCCCGCGCCGGCACGGTCAGCGTGGACGGCGCGCCGGTGGTGCTGACCGCCCACGAATTCCGCGTGCTGGACTAC
CTGATGCACCACCCGGGCGCGATCGTCAGCAAGACCGCGCTGACCGAGCACATCTACGCGCAGGACTTCGATCGCGACAG
CAATACCATCGAGGTCTTTGTCGGCCGGCTGCGGCGCAAGCTTGGCGTAGACATCATCGAGACCGTGCGCGGCCAGGGCT
ATCGGCTGCGCCCGCCGCCGGAGGCGCGCCCCTAG

Protein sequence :
MRILLVEDEATLAAQVRASLADAGYAVDTAADGLDAWHLGAEEPYDAVILDLGLPRLDGLSVLRRWRAAQVNAPVLILTA
RDSWTEKVEGIDAGADDYLSKPFRMEELLARIRALIRRAHGMPAPELQCGPVRMNPRAGTVSVDGAPVVLTAHEFRVLDY
LMHHPGAIVSKTALTEHIYAQDFDRDSNTIEVFVGRLRRKLGVDIIETVRGQGYRLRPPPEARP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-28 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-30 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RALTA_B1150 YP_002007810.1 response regulator, ompr family NC_002516.2.879194.p Protein 1e-38 46
RALTA_B1150 YP_002007810.1 response regulator, ompr family CP000647.1.gene1136. Protein 2e-37 45
RALTA_B1150 YP_002007810.1 response regulator, ompr family BAC0487 Protein 1e-30 45
RALTA_B1150 YP_002007810.1 response regulator, ompr family BAC0530 Protein 2e-37 45
RALTA_B1150 YP_002007810.1 response regulator, ompr family CP004022.1.gene1005. Protein 2e-38 44
RALTA_B1150 YP_002007810.1 response regulator, ompr family CP001138.1.gene1939. Protein 1e-37 44
RALTA_B1150 YP_002007810.1 response regulator, ompr family CP001918.1.gene2526. Protein 6e-36 43
RALTA_B1150 YP_002007810.1 response regulator, ompr family NC_002695.1.913289.p Protein 2e-35 43
RALTA_B1150 YP_002007810.1 response regulator, ompr family CP000034.1.gene2022. Protein 2e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RALTA_B1150 YP_002007810.1 response regulator, ompr family VFG0475 Protein 1e-37 44
RALTA_B1150 YP_002007810.1 response regulator, ompr family VFG1390 Protein 6e-30 43
RALTA_B1150 YP_002007810.1 response regulator, ompr family VFG0473 Protein 2e-25 42
RALTA_B1150 YP_002007810.1 response regulator, ompr family VFG0596 Protein 3e-30 42
RALTA_B1150 YP_002007810.1 response regulator, ompr family VFG1389 Protein 9e-25 41