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Name : kpsC (RALTA_B1099) Accession : YP_002007759.1 Strain : Genome accession: NC_010530 Putative virulence/resistance : Virulence Product : capsule polysaccharide transport protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3563 EC number : - Position : 1152898 - 1155120 bp Length : 2223 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 8397187; Product type t : transporter DNA sequence : GTGATGAGCCTTCCGTCTGAGGGCGCGATTGGCGTTCTTTCCCATGGCATTCGCCGGATTGAACACTTGTCCGCCTTCCT GGGTGGGCCGGTGGTCCCTGTGCATCCGTTGCGAGGCGCGGCGGTACCCCTATCAGCTGTGGCCGCATGGGGGCGGCGGC CTGCCGCCCGCAAGACCCAGGCGTTCGCGCAATCCCGGGGCATCGCGCGCTTCCTGTGCCTGGAAGATGGCTTCCTGCGC TCGCTGTATCCCGGCGCGTCCTCGCAGACCTGCTCGCTGGTCGTCGACGACCGCGGCATTTATTACGATGCCTCGGAGCC TTCCCGGCTGGAAGCGCTGGTTTCCACGCCGTTGCTGCCGGCCGAGCGGGAAAGGGCGCGGCAACTGATCGAACGCTGGC GCTGCACCGGAATCTCCAAGTACAACTATGCGCCTGCGCCGACATCGCTGCCGGCGCAGCCTTATGTGCTGGCCGTCGAC CAGACCGCGAACGATGCCTCGGTGCAGTATGGCCTGGCCGACGGCGACAGTTTCCGCCGCATGCTCGAGTCTGCCTTGCA GACTTATCCGCATTGCAGGATCGTGGTCAAGGAGCATCCCGAGGTCGCGCTCGGGCGCAAGCGTGGGTATCTTGGACGGA TTCTCGAACACGGCGGCTATCCGCGTGTGGAGCGGCTGCAGGACGATGTCCACGTGGTGCCGCTGATTCGCGGCGCGTGC GCTGTCTTCGCGGTGACCTCGCAGGTAGGCTTCGAAGCGCTCCTGCACGGCAAGACGGTTCATACCTTCGGCATGCCGTT CTATGCCGGCTGGGGCCTGACGATTGACGCGTTGCCGGCCCCGGGGAGGCGGCATCCTGTCGCGGTGGAGCAACTGGCCT TTGCCGCGCTGGTCCGATACACACGCTACGTCCAGCCGCATACCGGCAATCGCTGCGAGGTGGAGGACGCCATCGATTAC CTGGCGTTGCAACGCAGGATGTCCCAGCAGTTCCCGCGGCAACTGCATGCGACCGGATTTTCCCGCTGGAAACGCAAGAT ATTGAAGGACTTCCTGCAGGGCCACGAGGTGATGTTTCATCGCGGCCTGCGTTCTGTGCCACAAGGCGCAACGCTGCTGC GCTGGGGCCGGAGCATCGACGCAACGTCTCGCCCCGATCTCTCCGTGATCACGGTGGAGGATGGCTTTCTGCGCTCTGTC GGTCTTGGCGCTCAGTTAGTCCGACCGCTGTCATGGGTGTTTGATGGTTCCGGCATCTATTACGACGCGACCGGCGAGTC TGATCTCGAACGATTGCTGGCCACGACGGATTTCGACGTCGCCACCCTCGCGCGCGCCGCGCAACTGCGCGAATCCATCA TCCATGCCGGGCTCACCAAGTACAACGTCGGATCCGGCAGCTGGACCCGTCCTGCGGGCGTCGGACGGGTGATTCTGGCA GTTGGCCAGGTCGAGGCGGATGCCTCGCTGCGTTTTGGCGCCCCCGGCATCTGCACCAACCGCGCGCTGCTCGAGGCAGT GCGCGCCGAGGCGCCGGACGCGTATCTGGTCTATAAGCCTCATCCCGACGTCATGACCGGCCTGCGCGGCAATCGCGAGG AGGAGAAGGGGCTTGCAGCGCTGTGCGACGAACTGGTGCCGGACTGTCCGATGGACCGGCTTATCGCTGCGGTCGACGGC GTCCATGTGCTGACGTCGCTGGCCGGATTCGAGGCCTTGCTGCGTGGCAAGCCGGTCACCACGCATGGTGCGCCTTTCTA TGCCGGCTGGGGACTGACGGACGATCGCTGCGCAATGACGCGCAGGCATCGACGTCTTTCCGTGGATATGCTCGTCGCCG GCGCACTGATTCTATATCCCCGCTATGTCTTGCGCGATGGTCGGCACGGATTCGCGACCCCCGAAATTGCGGTGGCGCAT ATCTTGTCGTGGCGCGAACAGGCACAAGCCCGGTTGGGCTTCTGGCACGCCGTGACCCGGTTCCTGCTGCGGCGGAGGCT CCTTTGGCGTGATGCCGCTGCCATGCCGGACGGCCGCAAGCCCCGGGGCGCCTGCGATGCCAATGCCCCCGCGGATCCAC AGCACCTTTCGGCGCATGGAAAAATCGCTGCGCCAGAGCAATATGCCGTGGCGCAGGAAGGACAGAATCACGAACTACGA GTACGAGAGCAGCAAGAGGGTCGCCGCCATGTTGTCGTTCAGGGAGTCATCCGGAAGCACTGA Protein sequence : MMSLPSEGAIGVLSHGIRRIEHLSAFLGGPVVPVHPLRGAAVPLSAVAAWGRRPAARKTQAFAQSRGIARFLCLEDGFLR SLYPGASSQTCSLVVDDRGIYYDASEPSRLEALVSTPLLPAERERARQLIERWRCTGISKYNYAPAPTSLPAQPYVLAVD QTANDASVQYGLADGDSFRRMLESALQTYPHCRIVVKEHPEVALGRKRGYLGRILEHGGYPRVERLQDDVHVVPLIRGAC AVFAVTSQVGFEALLHGKTVHTFGMPFYAGWGLTIDALPAPGRRHPVAVEQLAFAALVRYTRYVQPHTGNRCEVEDAIDY LALQRRMSQQFPRQLHATGFSRWKRKILKDFLQGHEVMFHRGLRSVPQGATLLRWGRSIDATSRPDLSVITVEDGFLRSV GLGAQLVRPLSWVFDGSGIYYDATGESDLERLLATTDFDVATLARAAQLRESIIHAGLTKYNVGSGSWTRPAGVGRVILA VGQVEADASLRFGAPGICTNRALLEAVRAEAPDAYLVYKPHPDVMTGLRGNREEEKGLAALCDELVPDCPMDRLIAAVDG VHVLTSLAGFEALLRGKPVTTHGAPFYAGWGLTDDRCAMTRRHRRLSVDMLVAGALILYPRYVLRDGRHGFATPEIAVAH ILSWREQAQARLGFWHAVTRFLLRRRLLWRDAAAMPDGRKPRGACDANAPADPQHLSAHGKIAAPEQYAVAQEGQNHELR VREQQEGRRHVVVQGVIRKH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 2e-92 | 44 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 2e-92 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| kpsC | YP_002007759.1 | capsule polysaccharide transport protein | VFG0704 | Protein | 6e-92 | 42 |
| kpsC | YP_002007759.1 | capsule polysaccharide transport protein | VFG0692 | Protein | 2e-103 | 41 |
