|
Name : kpsD (RALTA_B1094) Accession : YP_002007755.1 Strain : Genome accession: NC_010530 Putative virulence/resistance : Virulence Product : polysialic acid transport protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1596 EC number : - Position : 1147273 - 1149012 bp Length : 1740 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8397187; Product type t : transporter DNA sequence : ATGCTTCGAAGATTCCTTGCCATCGCGGTCGCCGCGGCCAGCCTGGCCGGCGTCCACGGCGCGCATGCCCAGGGCGGCAC GGGCTGGTCCCAATCGCTGGCCGTTGGCCCGATGGAATACGCCGCGCTGGCGGCACAGGGCGCTGCCACACCCGATCGCG CGATGGTGGGCAATCCCGTCGCCACCATTCCGGCACGAGCCGAAACGTCGTTGCCCGACAGCGCCCCGCAGAACAACGAT TACACCGCCAACCTGGCCAGCGACGCCTTCGGCGCGCAGCTGTTCACCGGCGCCTTCAGCCGCGACAGTGCATCTATCTT CAATCCCAGCCATGTCATCTCCGTTGGTGATCGCATCCAGCTGCGCATCTGGAACGGATACAACGTCGACACCGTGCTGA CCGTCGACGCCGGCGGCAACATCGTTTTGCCGGAGGTGGGGCCGTTCCGGGTGCAGGGCGTCACCAATGGCAACCTCCAG GCCGCCGTCGGCAACGCGCTTCGACGGGTGTTTGCCAGCAAGGTGTCGATCTACGCCAGCCTGCTGGCCGCGCAGCCGGT GCGCGTCTACGTCACCGGTGCGGTGCGCCGCCCCGGCATGTACGACGGCACCTCCAGCGACAGCGTGCTGCGCTACCTGG ACCAGGCCGGCGGCATCGACCCCGACCGCGGCTCCTTCCTGGACGTCACCATCAAGCGCGGGAACCAGACACTGGAAGTC GTCAATCTCTATGACTTCCTGCTCAAGGGCGACCTGACCTCGCGGCAGCTGAACAATGGCGACGTCATTTTCGTCCAGTC GCGCAAGAAGACCGTCAAGGTCAGCGGCCTGGCCGAGAACGCCAAGCGCTTCGAATTCCTCGGCGAACAGGCCCGGCTTG ACCAGATCGTGCGGCTGGCCAAACCGCTGCCCGAAGCCACCAACGTCCGCGTGGTGCGCAATACCGGCACGGTGCGCAAT GTCGAGTACTTCCTTATTTCGCAGGGCAACCAGATCGACCTGCGCAACGGTGACGAAATCGAATTCACTGCGGACAAGCG GCCGGGAACCATCACCGTCCGCGTCGAAGGCGAGCACACCGGCCCGCAGGAGTACGTGCTGCCGTATGGCAGCCGCATGG GTCAGCTGCTCAGCCAGGTGCATTTCACGCAGGAGTCCGATACCGACAGTATCCAGCTCTTCCGCCAGAGCGTGAGGGCG CGCCAGAAGACGCTGCTGGCTACCACGCTCAAGAGCCTGGAATCCAGTGTGCTAACCGCGCGTTCCGGTACGGCGGAAGA AGCTCAATTGCGCAAGGAAGAAGCCGCGCTGGTGCTGCAGTGGGTGGAGCGGGCCAGGAAGATCGAGCCTTCCGGGCAGA CGCTGATCGCGAAGTCGACAACCCGCAATGACCTGCTGCTGGAAAATGGCGACATCCTGCGTGTGCCAGTCAAGGACGGG CTGGTCCTGGTCAGCGGGGAAGTGCTGTTCCCCAATGCCGTGGCGTATGACAAGAGCCTGGACCTGGACGACTTTATCCA GCAGGCCGGCGGCTTTTCGCAGAACGCGGATACCTCGCGAATCATCATCGCGCATCGGGATGGGAGCTTCTCGGATGGCA AGAAGGATGATGCCGTGCGGGCGGGCGACGAGATCATGGTGTTACCGAAGGTCGATTTCAAGACGCGGCAGTTTGCCAAG GACGTATTCCAGATTCTCTATCAGGTTGCGATTAGTGCGAAGGTCGTGCTGGGGCTATAG Protein sequence : MLRRFLAIAVAAASLAGVHGAHAQGGTGWSQSLAVGPMEYAALAAQGAATPDRAMVGNPVATIPARAETSLPDSAPQNND YTANLASDAFGAQLFTGAFSRDSASIFNPSHVISVGDRIQLRIWNGYNVDTVLTVDAGGNIVLPEVGPFRVQGVTNGNLQ AAVGNALRRVFASKVSIYASLLAAQPVRVYVTGAVRRPGMYDGTSSDSVLRYLDQAGGIDPDRGSFLDVTIKRGNQTLEV VNLYDFLLKGDLTSRQLNNGDVIFVQSRKKTVKVSGLAENAKRFEFLGEQARLDQIVRLAKPLPEATNVRVVRNTGTVRN VEYFLISQGNQIDLRNGDEIEFTADKRPGTITVRVEGEHTGPQEYVLPYGSRMGQLLSQVHFTQESDTDSIQLFRQSVRA RQKTLLATTLKSLESSVLTARSGTAEEAQLRKEEAALVLQWVERARKIEPSGQTLIAKSTTRNDLLLENGDILRVPVKDG LVLVSGEVLFPNAVAYDKSLDLDDFIQQAGGFSQNADTSRIIIAHRDGSFSDGKKDDAVRAGDEIMVLPKVDFKTRQFAK DVFQILYQVAISAKVVLGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsD | YP_854331.1 | polysialic acid transport protein KpsD precursor | Not tested | PAI I APEC-O1 | Protein | 9e-103 | 45 |
| kpsD | AAZ04468.1 | polysialic acid transport protein precursor | Virulence | PAI I APEC-O1 | Protein | 7e-103 | 45 |
| kpsD | CAE85212.1 | KpsD protein | Virulence | PAI V 536 | Protein | 7e-103 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| kpsD | YP_002007755.1 | polysialic acid transport protein | VFG1448 | Protein | 4e-103 | 45 |
