Gene Information

Name : pRALTA_0078 (pRALTA_0078)
Accession : YP_001795988.1
Strain :
Genome accession: NC_010529
Putative virulence/resistance : Unknown
Product : transposase, IS256 family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 73119 - 74378 bp
Length : 1260 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin

DNA sequence :
ATGCCACGCAAAACCAAGACCAGCCAGGCCGCCGACCGTGAGCTGCCGACCATTCCCGAGGACCTGATTGCCCATTTCGT
TAAGGGTCCGATGACCGCCGAGGCGGTGCAGGACGCCTCGATGGCGTTCAAGAAGGCCCTGATCGAGCGCGCCCTGGGGG
CCGAGCTCGGCCATCATCTGGGCTACCCGGCTGGCGCCGAGCGCCCGGCCGGCACGGCCAACCAGCGCAATGGCAAGAGC
GCCAAGACGGTTCTGACCGACGACGGGCCGCTGCGGTTAGACATCCCTCGCGATCGCGACGGCAGCTTTGATCCGATCCT
GATTCCCAAGCACGAGCGGCGCTTCACCGGGTTCGACGACAAGATCATCGCCATGTATGCGCGCGGCATGACCTTGCGCG
AGATCCAGGCGTTTCTGGCCGAACAGTACGGCACCGAGGTCTCGCCCGAGTTCATCAGTTCGGTGACCGATGCGGTCATG
GACGAGGTCACCGCCTGGCAGGCCCGTCCGCTGGAGGTGATGTACCCGGTGGTGTTCTTCGACGCGCTGCGGGTCAAGAT
GCGCGAGGACGGCGTGGTGCGCAACAAGGCCGTCTACCTGGCCTTGGGCGTGCTGCCCGACGGCACGCGCGACATCCTGG
GCCTGTGGATCGAGACTACCGAAGGCGCCAAGTTCTGGATGAAGGTGTTCAACGACCTGAAGACCCGGGGTACCCAAGAC
ATCCTGATCGCGGTGACCGATGGCCTTAAGGGCATGGAACAGGCCCTGGCCGCGGTGTTCCCGAACACCACCCTGCAGAC
CTGCATCGTGCATCTGATCCGCAACAGCCTGGAGTACGCCAACTGGAAGGAGCGCCGCGCCGTGGCGGCGGCGCTCAAGC
CCGTGTACACGGCCCCCACGGTCGAGGCCGCGCTGGCCGAGTTGGCGGCCTTCGAGAACGGGGAATGGGGTCGGCGGTAT
GCACCGATCGGCGCATCCTGGCGTCGCGCCTGGGATCAGGTGATCCCGTTCTTTACGTTCCCGCCGGCGATCCGCAAGAT
CATTTACACGACCAACGCGATCGAGAGCATCAACGCGCAGCTGCGCAAGATCATCAAGACGCGCGGTCACTTCCCCAGCG
ACGAGGCGGCGACCAAGCTGCTGTGGCTGGCGCTGCGAAACATCACGGTGAAGTGGGGCAGTTCAACCCATGACTGGAAG
GCTGCCATGAACCAGTTTGCGATCCTCTACGAGGAACGCTTCACCCACCCTTATCGTTAA

Protein sequence :
MPRKTKTSQAADRELPTIPEDLIAHFVKGPMTAEAVQDASMAFKKALIERALGAELGHHLGYPAGAERPAGTANQRNGKS
AKTVLTDDGPLRLDIPRDRDGSFDPILIPKHERRFTGFDDKIIAMYARGMTLREIQAFLAEQYGTEVSPEFISSVTDAVM
DEVTAWQARPLEVMYPVVFFDALRVKMREDGVVRNKAVYLALGVLPDGTRDILGLWIETTEGAKFWMKVFNDLKTRGTQD
ILIAVTDGLKGMEQALAAVFPNTTLQTCIVHLIRNSLEYANWKERRAVAAALKPVYTAPTVEAALAELAAFENGEWGRRY
APIGASWRRAWDQVIPFFTFPPAIRKIIYTTNAIESINAQLRKIIKTRGHFPSDEAATKLLWLALRNITVKWGSSTHDWK
AAMNQFAILYEERFTHPYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 2e-95 47
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 2e-80 46
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 7e-85 44
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 4e-85 44
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 2e-82 43