Gene Information

Name : pRALTA_0578 (pRALTA_0578)
Accession : YP_001796369.1
Strain :
Genome accession: NC_010529
Putative virulence/resistance : Unknown
Product : transposase, IS66 family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 482147 - 482482 bp
Length : 336 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin

DNA sequence :
ATGTTCCGCCTCGACGCTGGGCTGCGGGTGTATCTGCATCGCGACGCAGTGGACTTCCGTAAGAACATCAACGGCCTGGC
ACTGCTGGTCGAGCAGGCGCTCGGGCTGGATCCGTTTGCATCGGCTGTATTTGTGTTCCGTAACCAGCGGGCCGATCGTA
TCAAGATTCTCGGGTGGGATCGCAACGGCTTCTGGCTATTGTTGAAGCGATTGGAGGCGGACCGGTTTGCCTGGCCACGC
GAGGCGACAGTGGCTATGCTGACGGTCGAACCGTTGCACTGGCTGCTCCAGGGAATCGACATCGAGGCGATGCGCCGGCA
CCCGCACCGAGAATAG

Protein sequence :
MFRLDAGLRVYLHRDAVDFRKNINGLALLVEQALGLDPFASAVFVFRNQRADRIKILGWDRNGFWLLLKRLEADRFAWPR
EATVAMLTVEPLHWLLQGIDIEAMRRHPHRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 1e-16 49
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 1e-11 43
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 5e-12 43
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 5e-12 43
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 1e-10 43
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 1e-10 43
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 2e-10 42
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 2e-13 42
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 2e-10 42
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 2e-10 42
unnamed AAC31493.1 L0014 Not tested LEE Protein 1e-10 42
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 1e-10 42
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 1e-09 42
unnamed AAL99258.1 unknown Not tested LEE Protein 1e-10 42
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 1e-09 42
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 1e-10 42
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-10 42
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 6e-11 42
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 6e-11 42
unnamed AAL08461.1 unknown Not tested SRL Protein 1e-10 41
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-10 41
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 2e-10 41
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 2e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pRALTA_0578 YP_001796369.1 transposase, IS66 family VFG1665 Protein 6e-12 43
pRALTA_0578 YP_001796369.1 transposase, IS66 family VFG1709 Protein 5e-11 42
pRALTA_0578 YP_001796369.1 transposase, IS66 family VFG0792 Protein 5e-11 42
pRALTA_0578 YP_001796369.1 transposase, IS66 family VFG1698 Protein 4e-11 41
pRALTA_0578 YP_001796369.1 transposase, IS66 family VFG1052 Protein 5e-11 41
pRALTA_0578 YP_001796369.1 transposase, IS66 family VFG1517 Protein 7e-10 41