Gene Information

Name : pRALTA_0563 (pRALTA_0563)
Accession : YP_001796356.1
Strain :
Genome accession: NC_010529
Putative virulence/resistance : Unknown
Product : transposase, IS66 family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 468122 - 468397 bp
Length : 276 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin

DNA sequence : 
GTGTTCCGGTTCGACAGCGGGCTGAAGGTATTCCTGCATCGCGAGCCGGTGGACTTCCGGATGGGGATCAACGGGCTGTC
GATTCTGGTGGAGCAGGCGATGTTGCTCAACCCGTTTGACCACTCGCTGTACGTGTTCGGCAACCGACGGTGCGACCGTA
TCAAGATCCTCGGCTGGGACGGTGCTGGTTTCTGGTTATTCCTCAAGCGATTGGAAGCCGAGGATCGCTTCGTGTGGCCG
GACACGACCGATATCGTCACGCTCACCGTCGATTAG

Protein sequence : 
MFRFDSGLKVFLHREPVDFRMGINGLSILVEQAMLLNPFDHSLYVFGNRRCDRIKILGWDGAGFWLFLKRLEAEDRFVWP
DTTDIVTLTVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 3e-11 49
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 3e-08 43
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 3e-08 43
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 3e-08 43
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 3e-08 43
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 7e-08 42
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 4e-08 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pRALTA_0563 YP_001796356.1 transposase, IS66 family VFG1665 Protein 3e-08 42
pRALTA_0563 YP_001796356.1 transposase, IS66 family VFG1737 Protein 1e-08 42