Gene Information

Name : pRALTA_0417 (pRALTA_0417)
Accession : YP_001796255.1
Strain :
Genome accession: NC_010529
Putative virulence/resistance : Unknown
Product : IS66 Orf2 like
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 361387 - 361776 bp
Length : 390 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin

DNA sequence :
ATGCCGGGCCTTCCCGCTGGAACGCGGGTGTGGCTGGCTGCTGGTGTGACCGATATGCGCTCTGGCTTCAACAGCCTGGC
CGCGAAGGTGCAGACCGTGCTAGAGCGGGACCCGTTCAGCGGCCACGTGTTTGTGTTCCGTGGCCGACGAGGCGATCTGG
TCAAGGTGCTTTGGTGGAGCGGTGATGGCATGTGTCTGCTGATGAAACGGCTTGAACGCGGCCGCTTCGTCTGGCCTCGT
GCGGATGGAGGTGTCGTCAGCCTGAGCCAGGCGCAGCTCTCAATGCTGCTGGAAGGCATCGACTGGCGACTAGATAGCGT
CAAGCAGGACGGCCGGTCCAGCGACAATCATTTTGGCCGGTTGGCCGGGATGATTGTCGGTGAGTGTTAG

Protein sequence :
MPGLPAGTRVWLAAGVTDMRSGFNSLAAKVQTVLERDPFSGHVFVFRGRRGDLVKVLWWSGDGMCLLMKRLERGRFVWPR
ADGGVVSLSQAQLSMLLEGIDWRLDSVKQDGRSSDNHFGRLAGMIVGEC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 7e-36 78
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 2e-32 71
unnamed AAL99258.1 unknown Not tested LEE Protein 2e-32 71
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-32 71
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 2e-32 71
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 3e-32 71
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 3e-32 71
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 3e-32 71
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 1e-31 71
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 1e-31 71
unnamed AAC31493.1 L0014 Not tested LEE Protein 2e-32 71
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 6e-32 70
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 6e-32 70
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 4e-33 69
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 4e-33 69
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 4e-33 69
unnamed AAL08461.1 unknown Not tested SRL Protein 4e-32 69
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 2e-30 66
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 2e-30 66
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 3e-30 60
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 3e-30 60
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 4e-29 60
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 4e-29 60
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 3e-30 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pRALTA_0417 YP_001796255.1 IS66 Orf2 like VFG0792 Protein 7e-33 71
pRALTA_0417 YP_001796255.1 IS66 Orf2 like VFG1709 Protein 7e-33 71
pRALTA_0417 YP_001796255.1 IS66 Orf2 like VFG1698 Protein 2e-32 70
pRALTA_0417 YP_001796255.1 IS66 Orf2 like VFG1665 Protein 2e-33 69
pRALTA_0417 YP_001796255.1 IS66 Orf2 like VFG1052 Protein 1e-32 69
pRALTA_0417 YP_001796255.1 IS66 Orf2 like VFG1737 Protein 9e-31 58