Gene Information

Name : insF (pRALTA_0368)
Accession : YP_001796214.1
Strain :
Genome accession: NC_010529
Putative virulence/resistance : Unknown
Product : transposase InsF for insertion sequence IS3
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 314721 - 315515 bp
Length : 795 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence : 
GTGAGCTACCGCCTGGTAGCCCATTTGCAACAGGAGGCCGTATCGGTCAGTGATGCCTGCCGGGTATTGCAGGTGAGCCG
CTCCGGCTACTATGCGCACCGCCGCGCCAAGCCGAGCACGAAGGCTCTGCAGGAGCAGACCCACGTCAAAGCGGCGTTCG
CTGCCAGCGGCGCGAGCTACGGCAGCCGGCGTGTCATGCATGCGCTGAGGGCACAAGGGCTGCGCCTTGGCCGGTACCGG
ATTCGTACGCTGATGCGCGAGGCAGAGCTGCGCACGAACTGGAAGCGTAAGTTCGTGTCGACGACCAACAGCAAGCACGC
TCTGCCAGTGGCCGAGAACGTGCTGGATCGTCAATTTGACGTGGCTGAGCCGAAGCGGGCCTGGGTGTCGGACATCACCT
ATGTCCGCACGGCCCAGGGCTGGCTGTATTTGGCTGTCGTGCTGGACTTGTACTCGCGCAAGGTCGTGGGCTGGGCGATG
GCGCCGACCATGCCGACGGACCTGGTCATGTCGGCGCTGACCATGGCGCTGCAGCAGCGTCGGCCAGGACCAGGACTGGT
GCTGCACTCGGACAGAGGCAGTCAGTACGCGAGCGCAGAGTATCAGGCTTTGCTGAGACGGCATCAGATCGTTTGCAGCA
TGAGTCGAAAAGGCAATTGTTGGGATAACGCGGTGATGGAGCGGTTCTTCCTGAACCTGAAGATGGAGCGCGTGTGGCGG
GGCCTGTCAGTTTTTTTGTGTGCAGGGCAGGTAAAGGCTCACCGTCGATGGAACGGTGAGCCAGCAATATCTTAA

Protein sequence : 
MSYRLVAHLQQEAVSVSDACRVLQVSRSGYYAHRRAKPSTKALQEQTHVKAAFAASGASYGSRRVMHALRAQGLRLGRYR
IRTLMREAELRTNWKRKFVSTTNSKHALPVAENVLDRQFDVAEPKRAWVSDITYVRTAQGWLYLAVVLDLYSRKVVGWAM
APTMPTDLVMSALTMALQQRRPGPGLVLHSDRGSQYASAEYQALLRRHQIVCSMSRKGNCWDNAVMERFFLNLKMERVWR
GLSVFLCAGQVKAHRRWNGEPAIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF09022.1 unknown Not tested SHI-O Protein 6e-38 45
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-37 45
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 1e-37 45
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-37 45
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 1e-37 45
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-37 45
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-37 45
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 9e-38 45
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 8e-40 44
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-40 44
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-40 44
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 9e-38 44
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-38 43
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-38 43
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-38 43
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 9e-39 41
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 7e-36 41
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 9e-36 41
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 7e-36 41
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 7e-36 41
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 7e-36 41
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 7e-36 41
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 7e-36 41
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 9e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insF YP_001796214.1 transposase InsF for insertion sequence IS3 VFG1706 Protein 5e-38 45
insF YP_001796214.1 transposase InsF for insertion sequence IS3 VFG1631 Protein 5e-39 41
insF YP_001796214.1 transposase InsF for insertion sequence IS3 VFG1122 Protein 4e-36 41