Gene Information

Name : pRALTA_0347 (pRALTA_0347)
Accession : YP_001796196.1
Strain :
Genome accession: NC_010529
Putative virulence/resistance : Unknown
Product : transposase, IS21 family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 297295 - 298716 bp
Length : 1422 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
ATGGCGAAGGCAGCGGGGCTGGATTGGGCGCAGGCGGATAGCCTGAACGAGGATACGCTGGAGCAGCGGCTGTTCGGCGC
ACAGAAGCCGGCCAACAGCCCGGGCGGACGGGTGACGCCGGACTTCCCCTACCTGCACCGCGAGCTGCGCCGCAAGGGCG
TGACACTGCAGTTGCTGTGGGAGGAATACCTGGACGCGAATCCCGGGGTCCCCATTTACCAATACACGCAGTTCTGCTGC
CGTTACCGGGACTGGGCAGCGACACTCAAGCGGTCCATGCGCCAGCAGCACCGCGCCGGCGAGAAGCTGTTTGCGGACTT
CGCAGGTCAGATGGTGCCGATTCTGGACCCGGAAGGCGGCCTTGCGTTTGAAGCCAGCATCTTCGTCGCTGTGCTTGGCG
CGTCGAATTACACATACGCGTGCGCCACCCGGGGGCAGACCACCGCCGACTGGATCGGGGGAATGGTCTGTGCGATGGAA
TTCGCCGGCGGCGTGCCTGAGCTGCTTGTGCCGGACAACCCGCGCGCGCTGGTGGCTCGCCCTGACCGATACGAGCCAGT
GCTGTCCCGAACTGCAGAAGACTTCGTTCATCACTACGGCACGGCCATGCTGCCGGCACGGCCGCGCAAACCGCAAGACA
AGGCCAAGGTCGAGACCGGCGTGCTGATCGTCGAGCGGTGGATCCTGGCGCGGCTGCGCAACCATCGCTTTTACAGCTTG
GGCGAGCTCAACAAGGCCATCAAGAAGCTCGTCGCCGACCTGAATGACCGACCGTTCAAGAAGCTGCCTGGCACGCGCCG
GGAGTGGTTCGAGCGGTTGGACCGGCCAGTGTTGCGACCGCTGCCGCCGCGGCGCTACGAAGTTGCAACGTTCAAACAAT
GCCGCGTCAACGTCGACTACCACGTCGAGATCGACGGTCACTACTACAGCGTGCCGCATGCCCTGGTGCGAAAGGCGGTC
GAGGCTCGCGTAACCCGCCACACCATCGAGATCCTGTACGGTGGCAAACGGGTGGCGCTGCACGCGCGCAATACCCGCAA
GGGCAGCCACAGCACGGTCAAGGAACACATGCCGGTGGCCCACCGCGCGCACCTCGAATGGACGCCCGGCCGGCTGCTCA
ACTGGGCAGCCTCGATTGGGCCCAACGTCGCCGTCATCGTCGAATACCAGCTCACCCACAAGAGCCATCCCGAGATGGGC
TATCGCGCCTGCCTGGGTCTGCTGAGTCTGGCCAAGAAGTACAGCAAGGAGCGGCTCGAAGCCGCTTGCGCTCGCGCCGT
CGCCATTGGCTCGCTCACGCGTAAGTCTGTGGTCTCCATCCTTGAAAACCATCTGGACCGGCAAGCCACTCTGCCGGTAT
CGCAAACCGAGTGGCATTCCCCCATGCACGACAACGTGCGCGGACCCGACTACTACCATTAG

Protein sequence :
MAKAAGLDWAQADSLNEDTLEQRLFGAQKPANSPGGRVTPDFPYLHRELRRKGVTLQLLWEEYLDANPGVPIYQYTQFCC
RYRDWAATLKRSMRQQHRAGEKLFADFAGQMVPILDPEGGLAFEASIFVAVLGASNYTYACATRGQTTADWIGGMVCAME
FAGGVPELLVPDNPRALVARPDRYEPVLSRTAEDFVHHYGTAMLPARPRKPQDKAKVETGVLIVERWILARLRNHRFYSL
GELNKAIKKLVADLNDRPFKKLPGTRREWFERLDRPVLRPLPPRRYEVATFKQCRVNVDYHVEIDGHYYSVPHALVRKAV
EARVTRHTIEILYGGKRVALHARNTRKGSHSTVKEHMPVAHRAHLEWTPGRLLNWAASIGPNVAVIVEYQLTHKSHPEMG
YRACLGLLSLAKKYSKERLEAACARAVAIGSLTRKSVVSILENHLDRQATLPVSQTEWHSPMHDNVRGPDYYH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 1e-90 47
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 9e-91 47
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 5e-91 47
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 7e-90 45