|
Name : pRALTA_0296 (pRALTA_0296) Accession : YP_001796161.1 Strain : Genome accession: NC_010529 Putative virulence/resistance : Unknown Product : transposase, IS21 family Function : - COG functional category : - COG ID : - EC number : - Position : 250720 - 252216 bp Length : 1497 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin DNA sequence : ATGTCCGGGATCCACATTACGGACCAGCAGGTCCGCCTCTTCATGAACAAGCGCAAACATCACACCCAGGAAGTTGCAGC GGCAATGGCCGGCATGAGCGTCCGCACAGCGCGGCGAATCGAGCACCGCGACCATCTGCCGTCGCAGAAGACGCCACGCA CGTGGCGCACTCGTTCCGATCCGTTTGCTGATGGGGACAGCGAGATCGTGCCGCTGCTGCGCCTCTCGCCCCGGCTCAAG GCAGTCACGTTGCTGGCCAAGCTGCAGGAGGCTCATCCCGATCGGTTCCCCGACAGCATGCGACGCATGCTGGAACGGCG CGTTAGCCAGTGGCGCGCGATCGAGGGCCCCAGCAAGGAGATCTTCTTCCCGCAGGAACACCTGCCCGGCGTGCAGGGCC TGTCGGACTTCACCGACATGCGCGATCTGCACGTGACCGTCGCCGGCGCGCCGTTCGGGCACAGGCTGTATCACTTCGTG CTTGCGTTCTCGCACTGGGAATACGCTGGCGTCGTCGAAGGCGGCGAGAGCTTCGAAGCCTTGTCTAACGGCTTGCAGAA TGCGCTCTGGCAGGCCGGCGGCTGCCCGCGCGAACATCGCACTGACAGCCTGTCGGCTGCGTTCAAGAACCTGCAGCAAC AAGAGGACTTCACGGCCCGCTACGCCGCGCTGCTCGAGCATTACGGCATGACGGGCACACGCAACAACGTCGGCGTGGCT CACGAGAACGGCAGCGTTGAGTCGTCTCATCGCCATCTGAAGGAAGCCGTCGACCAGGCTCTCATGCTGCGCGGCCATCG CGACTTCGCAGATCGCACCGCTTACGAGGACTTCGTGCGCGAGGTCGTGATGCGGCGCAACCGCCGCAACGCCGCCGCGT TCAACGTCGAGCGTGAACATTTGCAGGATCTGCCGCTGCGGCGCACTACCGACTTCGTCGAGGAGGAGGCACGCGTGACG CGCTGCGGCACCTTCACGGTGCGCGGCATCCTCTACAGCGCGCCGTCGCGCCTGATCGGCCACAGGCTGAAGGTGCGGAT CTACCCCGATCGGATCGACTGCTATCTGTCGGGGGCCTTGGTGCACAGCACCGCGCGTGGGTCTCATGCCGCTAACAGCC GTCGTCGCGCGCTTGACTACCGGCACTTCGTGGACGAGCTCAAGCGCAAGCCCCAGGCGTTCAAGGGGTTGGCGTTCCGC GACGACCTGTTCCCACGCGAAGCGTACCGCCGGGCCTGGGAACAGCTCGAAGCCCGGATGACGCAGCGCGATGCCTGCAA GACCATGGTCGGTTTGCTCGATCTCGCCGCGAACCACGGCGTCGAGGTCGTCCTTGCCGCCCGGCTCGAGGCCTTGCTGA CTGCGGGCGAATTACCGGACCTCGAACAACTGCGCAGCGAGTTCGCACCGCGGCAAGCGCAGTGTCCGGAGGTAGTCGTC GAGACGCCAGCGGCGTCGCTCTATGACACGTTGCTCGACGCGGAGGTGACAGCATGA Protein sequence : MSGIHITDQQVRLFMNKRKHHTQEVAAAMAGMSVRTARRIEHRDHLPSQKTPRTWRTRSDPFADGDSEIVPLLRLSPRLK AVTLLAKLQEAHPDRFPDSMRRMLERRVSQWRAIEGPSKEIFFPQEHLPGVQGLSDFTDMRDLHVTVAGAPFGHRLYHFV LAFSHWEYAGVVEGGESFEALSNGLQNALWQAGGCPREHRTDSLSAAFKNLQQQEDFTARYAALLEHYGMTGTRNNVGVA HENGSVESSHRHLKEAVDQALMLRGHRDFADRTAYEDFVREVVMRRNRRNAAAFNVEREHLQDLPLRRTTDFVEEEARVT RCGTFTVRGILYSAPSRLIGHRLKVRIYPDRIDCYLSGALVHSTARGSHAANSRRRALDYRHFVDELKRKPQAFKGLAFR DDLFPREAYRRAWEQLEARMTQRDACKTMVGLLDLAANHGVEVVLAARLEALLTAGELPDLEQLRSEFAPRQAQCPEVVV ETPAASLYDTLLDAEVTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| c3607 | NP_755482.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 2e-85 | 44 |
| c5144 | NP_756992.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 2e-85 | 44 |
| unnamed | AAL67341.1 | R6-like protein | Not tested | PAI II CFT073 | Protein | 6e-84 | 44 |
| r6 | AAC61728.1 | transposase R6 | Not tested | PAI I CFT073 | Protein | 2e-84 | 44 |
| unnamed | AAL67386.1 | R6-like protein | Not tested | PAI II CFT073 | Protein | 2e-84 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pRALTA_0296 | YP_001796161.1 | transposase, IS21 family | VFG1728 | Protein | 1e-85 | 44 |
