Gene Information

Name : pRALTA_0280 (pRALTA_0280)
Accession : YP_001796150.1
Strain :
Genome accession: NC_010529
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 238805 - 239536 bp
Length : 732 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin

DNA sequence :
GTGGCGCTGGAGTGGGGGTCGCTGGCACAGCGGGTGGCGACCGAGGACGCCAGTCTGGCCGACTTCCTGGAGCGGCTGCT
CAACACCGAGGTTGCCGCCCGCGAGGAGCGCAAGCGTCAGGTGCTGACCAAGCTGGCGACACTGCCGTCGGTAAGGACGC
TGGAGCAGTACGACTTCGGCTTCGCCAGCGGCGCACCGCGCATGCAGATACAGGAGTTGGGCAGCCTGGCGTTTATCGAG
CGCGCCGAGAACGTTGTGCTGCTCGGGCCGTCCGGCGTCGGCAAGACACATCTGGCGACGGCGCTGGCCTATCGCGCGAC
GCAGGCTGGCATCAAGAGCCGCTTCCTGACGGCGGCTGACCTGATGATGCAACTAGCGACTGCGCGGCAGCAGGGGCGGC
TGCGCGAGTACTTCAATCGGGCCGTGATGGGACCCAGGTTATTGGTGGTCGACGAAATCGGCTACCTGACGTTCGGGCGG
GAAGAGGCGAACCTGTTCTTCAATGTCGTCGCCAAGCGCTACGAGCGGGGTTCGATGGTGTTGACCAGCAACCTGCCGTT
TGCGCAATGGGCGACCGCCTTTGCCGACGACCAGACGCTAACGGCGGCGATGCTCGACCGGCTCCTGCATCACGCCCATA
TCGTGCAGATTACAGGGGAAAGCTACCGGCTCAAGGACAAGCGCCGGGCAGGTCAAACGAACGGCCGAGCCGCCGCCAAG
GCGGCTGGCTGA

Protein sequence :
MALEWGSLAQRVATEDASLADFLERLLNTEVAAREERKRQVLTKLATLPSVRTLEQYDFGFASGAPRMQIQELGSLAFIE
RAENVVLLGPSGVGKTHLATALAYRATQAGIKSRFLTAADLMMQLATARQQGRLREYFNRAVMGPRLLVVDEIGYLTFGR
EEANLFFNVVAKRYERGSMVLTSNLPFAQWATAFADDQTLTAAMLDRLLHHAHIVQITGESYRLKDKRRAGQTNGRAAAK
AAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 8e-72 62
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-62 61
api84 CAF28558.1 putative transposase Not tested YAPI Protein 3e-71 61
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 3e-71 61
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-71 61
unnamed CAA21402.1 - Not tested HPI Protein 3e-71 61
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 3e-71 61
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 3e-71 61
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 3e-71 61
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 3e-71 61
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 3e-71 61
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 4e-71 61
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 4e-71 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pRALTA_0280 YP_001796150.1 transposase/IS protein VFG1663 Protein 5e-72 62
pRALTA_0280 YP_001796150.1 transposase/IS protein VFG1460 Protein 1e-62 61
pRALTA_0280 YP_001796150.1 transposase/IS protein VFG1606 Protein 1e-71 61
pRALTA_0280 YP_001796150.1 transposase/IS protein VFG1515 Protein 1e-71 61
pRALTA_0280 YP_001796150.1 transposase/IS protein VFG1627 Protein 1e-71 61