|
Name : vsrD (RALTA_A0096) Accession : YP_001795491.1 Strain : Genome accession: NC_010528 Putative virulence/resistance : Virulence Product : LuxR family transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2197 EC number : - Position : 94870 - 95502 bp Length : 633 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7868600, 11073909; Product type pr : regulator DNA sequence : ATGATCCGCGTCCTGATCGCCGACGACCACGAGATTGTGCGTGCCGGGCTGCGTCAGTTTATTTCCGAAGAACCCGATAT CCAGGTAACCGGCGAGGCCGGCAGTGGCGACGAAGTCATGGCGCAGCTGCGCGATGGCGAGTTCGACGTACTGGTGCTGG ACATCTCGATGCCCGACCGCAACGGCATCGACGTGCTCAAGCTGATCCGGCAGCGCAAGCCTGACCTGCCGGTGCTGATC CTGTCGACCTACCCGGAAGACCAGTACGCGATCAACCTGATCCGTGCCGGCGCGTCGGGCTACCTGACCAAGGAAAGCGC ACCCGACGACCTGGTCAAGGCGATCCGCACGGTGGCGCAGGGCCGCCGCTATGTGAGCGCCACCGTGGCGGACTTGCTGA TCGGCGGGCTCGACAAGCCAACCGAGCAGCCGGTGCACCAGATGCTGTCCGAGCGCGAATTCCAGATCTTCTGCAAGCTC TCGCGCGGCCAGTCGGTGTCGGTGATCGCCGACGAACTGTTCCTCAGCGTCAAGACAGTCAGCACTTACCGTTCGCGCAT CCTGGAGAAAATGGGCATGAAGACCAACGCCGACCTGACCTATTACGCGATCAAGAACGGCCTGGTGGAATAG Protein sequence : MIRVLIADDHEIVRAGLRQFISEEPDIQVTGEAGSGDEVMAQLRDGEFDVLVLDISMPDRNGIDVLKLIRQRKPDLPVLI LSTYPEDQYAINLIRAGASGYLTKESAPDDLVKAIRTVAQGRRYVSATVADLLIGGLDKPTEQPVHQMLSEREFQIFCKL SRGQSVSVIADELFLSVKTVSTYRSRILEKMGMKTNADLTYYAIKNGLVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpY | AAD24683.1 | response regulator HrpY | Virulence | Hrp PAI | Protein | 5e-35 | 42 |
| BJAB07104_00302 | YP_008207767.1 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | Not tested | AbaR25 | Protein | 1e-33 | 41 |
| BJAB0868_00306 | YP_008211632.1 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | Not tested | AbaR26 | Protein | 1e-33 | 41 |
