Gene Information

Name : sciK (RALTA_A0610)
Accession : YP_002004662.1
Strain :
Genome accession: NC_010528
Putative virulence/resistance : Virulence
Product : hcp-related (hemolysin-coregulated protein) protein; replication/virulence associated protein; duf796
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 631322 - 631807 bp
Length : 486 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 12437215, 16763151; Product type ph : phenotype

DNA sequence :

ATGGCACAGGACATTTTCCTGAAGATCAACGGCATCGATGGCGAGTCGCAGGATGCCTCGCACAAGAATGAAATCGAAGT
GCTGGCCTGGGACTGGAGCATCGAGCAACAGTCCACCATGCACGCGGGCAGCGGCGGCGGCGCCGGCAAGGCCACCGTGT
CGGACCTGTCCTTCGAGCACTTCATCGATCGCGCTTCGCCCAACCTGATGAAGTACTGCCTGACCGGCAAGCACATCAAC
GAGGCGGTGCTGGTGGTGCGCAAGGCAGGCGGCAATCCGCTCGAATACCTGAAGCTCACCATGACCGACGTCATCGTCAC
CAGGGTGAGCCCCAAGGGCTCGGTGGATGACGAAGTGCGCATGCGCGAGCAGGTGGCGCTGTCGTTCTCCAGGGTCAAGC
AGGAGTATGTGGTGCAGAACGCCCAGGGCGGCAGCGGCGGGGCGGTGACCGCGGGCTACGACATCAAGGGCAACAAGGAA
GCCTGA

Protein sequence :

MAQDIFLKINGIDGESQDASHKNEIEVLAWDWSIEQQSTMHAGSGGGAGKATVSDLSFEHFIDRASPNLMKYCLTGKHIN
EAVLVVRKAGGNPLEYLKLTMTDVIVTRVSPKGSVDDEVRMREQVALSFSRVKQEYVVQNAQGGSGGAVTAGYDIKGNKE
A

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0302	NP_454882.1	conserved hypothetical protein	Not tested	SPI-6	Protein	1e-53	72

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
sciK	YP_002004662.1	hcp-related (hemolysin-coregulated protein) protein; replication/virulence associated protein; duf796	VFG2071	Protein	3e-27	48