Gene Information

Name : pehR (RALTA_A2688)
Accession : YP_002006680.1
Strain :
Genome accession: NC_010528
Putative virulence/resistance : Virulence
Product : response regulator receiver, fis type, sigma 54 interacting region
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 2845332 - 2846972 bp
Length : 1641 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9390420; Product type r : regulator

DNA sequence : 
ATGCCACCCCGACTGTCCCGCGCGCCCGATCCCATCCTGGTCATCGACGACGAGGCCGACCTGCGCGAGCTGCTGGACAT
CTCGATCCGCCGCATGGGCCATGACGTGGTGCTGGCCGGCTCGCTGGCCGAGGCGCGCGCGAAGCTGGCGCAAGGCCGCT
ACAGCCTGGTGCTGACCGACATGCGCCTGGGCGACGGGCTGGGCATCGAGATCGTGCGCCAGCTGTCGGCCGCGCCGGAA
CGCATCCCGGTGGCCGTGATCACCGCCTACGGCAGCGCCGACAACGCCGTCGAGGCGCTCAAGGCCGGCGCCTTCGACTA
CATCGCCAAGCCGGTGTCGCTGGAACAGCTGCGCAGCCTGGTGCTGAACGCGCTGGGCCGCCAGCCGCGCGACAACGCCG
ATGCCGACGCCGCCGCGGCGGCGGAGCAGGCCGCCGACCGCGCCGCGGCGCTGCTGCCCGGCCATTCCGCGGCGATGCAG
GAGGTGCGCCGCTCGCTGTCGCGGCTGGCGCGCAGCATGGCGCCGGTGGTCATCAGCGGCGAATCCGGCAGCGGCAAGGA
GCGCGCCGCGCGCGCCATCCACGCCACCAGCGCGCGCGCCGCGCATCCGTTCGTCGCCGTCAACTGCGGCGCCATCCCCG
AGAACCTGATGGAGTCCGAATTCTTCGGCTACGTCAAAGGGGCCTTCACCGGCGCCGATGCCGAGCGCGGCGGCTTCTTC
CAGGCCGCCAACGGCGGCACGCTGCTGCTCGATGAAGTGGCCGACCTGCCGCTGCCGATGCAGGTCAAGCTGCTGCGCGC
GCTGCAGGAGCGCCGCGTGCGCAAGATCGGCGCCAGCCGCGAAGACGCCGTAGACGTGCGCGTGATGTGCGCCAGCCACA
AGGACCTGGCGGCGATGGTGGCGGCCGGGCAGTTCCGGCAAGACCTGTATTACCGGCTGAATGTGCTGGCGCTGCGCATG
CCCACGCTGCGCGAGCGTGGCGAAGACATCCCGGTGCTGGCCCGCGCCATCCTGGACCACCTGGCGGTGCGCTACGGCGA
TGCGCACCCCAAGCGGCTGTCGCCAGAGGCGCTGCAGCGGCTGGCGGCCTATCCGTTCCCGGGCAATGTGCGCGAGCTGG
AAAACCTGCTCGAGCGCGCCTACGCGTTTGCGGAAAGCGATGACATCGCGCTGGCCGACCTGGGACCGCTGGACGCGGGC
ACCGGGCGCGCCGGGCTGATGCCGGCACCGGCGCCGACGATGGCGCCCCAGCCGATGGCGCCTTACCCGTACGCCCCCTG
GGGCACCGGCGTGGTGGCGCCCGTGCCGGCCGCCGCAACGCCTGCGCCTGTACCGCCCCCGGCCGAACCGCTCCCGGCAG
CCCCCGCGCACGCCGCACCCGAACCCGAGCCCGCCGGCGACCCCGCCGAGCGTGCCTGCCGCGGCATCGTCTTCCCGATC
GACCTGCCGGCCAAACTGGAAGCGGTCGAGCGCGAACTGATCCTGCAGGCGCTGGCGCAGACCAACTTCAACCGCACCGC
GGCCGCGCCGCTGCTGGGCCTGAACCTGCGCCAGCTGCGCTACCGCATCCAGCAACTTGGCATCCGCGAGGCCATGGACG
CCGCCGACCGCGGCGCGGTGGAAGGCGAGGGCACGCCATGA

Protein sequence : 
MPPRLSRAPDPILVIDDEADLRELLDISIRRMGHDVVLAGSLAEARAKLAQGRYSLVLTDMRLGDGLGIEIVRQLSAAPE
RIPVAVITAYGSADNAVEALKAGAFDYIAKPVSLEQLRSLVLNALGRQPRDNADADAAAAAEQAADRAAALLPGHSAAMQ
EVRRSLSRLARSMAPVVISGESGSGKERAARAIHATSARAAHPFVAVNCGAIPENLMESEFFGYVKGAFTGADAERGGFF
QAANGGTLLLDEVADLPLPMQVKLLRALQERRVRKIGASREDAVDVRVMCASHKDLAAMVAAGQFRQDLYYRLNVLALRM
PTLRERGEDIPVLARAILDHLAVRYGDAHPKRLSPEALQRLAAYPFPGNVRELENLLERAYAFAESDDIALADLGPLDAG
TGRAGLMPAPAPTMAPQPMAPYPYAPWGTGVVAPVPAAATPAPVPPPAEPLPAAPAHAAPEPEPAGDPAERACRGIVFPI
DLPAKLEAVERELILQALAQTNFNRTAAAPLLGLNLRQLRYRIQQLGIREAMDAADRGAVEGEGTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-70 45
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-70 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pehR YP_002006680.1 response regulator receiver, fis type, sigma 54 interacting region BAC0467 Protein 3e-61 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pehR YP_002006680.1 response regulator receiver, fis type, sigma 54 interacting region VFG1214 Protein 2e-84 55
pehR YP_002006680.1 response regulator receiver, fis type, sigma 54 interacting region VFG1249 Protein 4e-49 42
pehR YP_002006680.1 response regulator receiver, fis type, sigma 54 interacting region VFG0116 Protein 2e-50 41