Gene Information

Name : RALTA_A2166 (RALTA_A2166)
Accession : YP_002006166.1
Strain :
Genome accession: NC_010528
Putative virulence/resistance : Virulence
Product : small multidrug resistance protein (smr family)
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 2296054 - 2296386 bp
Length : 333 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pm : membrane component

DNA sequence : 
ATGAACGGATACCTGCTTCTCGCCCTCGCCATCGTTGCCGAAGTCATCGCCACCAGCAGCCTGAAAGCCTCGCAGGGATT
TACCCGGCTGCTGCCCAGCGTGCTGGTGGTCACCGGCTACGTCGCCGCTTTTTATCTGCTGATGCTGGTGATGCGCACGG
TCCCGGTCGGCATCGCCTATGCGATCTGGAGCGGCGCCGGCATCGTGCTGGTCTCGCTGATCGCGGTGGTGTTGTACCGG
CAGGTACCGGACCTGGCGGCGTGTGTCGGGATCGGGCTGATTATTGCCGGCGTGGCGGTGATCCAGCTGTTTTCGAAGAC
GAGCGCGCATTGA

Protein sequence : 
MNGYLLLALAIVAEVIATSSLKASQGFTRLLPSVLVVTGYVAAFYLLMLVMRTVPVGIAYAIWSGAGIVLVSLIAVVLYR
QVPDLAACVGIGLIIAGVAVIQLFSKTSAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 2e-08 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RALTA_A2166 YP_002006166.1 small multidrug resistance protein (smr family) BAC0377 Protein 1e-13 63
RALTA_A2166 YP_002006166.1 small multidrug resistance protein (smr family) BAC0002 Protein 4e-15 60
RALTA_A2166 YP_002006166.1 small multidrug resistance protein (smr family) NC_010410.6003348.p0 Protein 4e-15 60
RALTA_A2166 YP_002006166.1 small multidrug resistance protein (smr family) CP004022.1.gene1549. Protein 2e-12 59
RALTA_A2166 YP_002006166.1 small multidrug resistance protein (smr family) BAC0322 Protein 2e-13 54
RALTA_A2166 YP_002006166.1 small multidrug resistance protein (smr family) CP001138.1.gene1489. Protein 2e-12 54
RALTA_A2166 YP_002006166.1 small multidrug resistance protein (smr family) NC_002695.1.913273.p Protein 1e-09 51
RALTA_A2166 YP_002006166.1 small multidrug resistance protein (smr family) BAC0150 Protein 1e-09 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RALTA_A2166 YP_002006166.1 small multidrug resistance protein (smr family) VFG1587 Protein 6e-09 41