Gene Information

Name : Lcho_0882 (Lcho_0882)
Accession : YP_001789919.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 945163 - 945390 bp
Length : 228 bp
Strand : -
Note : PFAM: Prophage CP4-57 regulatory; KEGG: hha:Hhal_1156 phage transcriptional regulator, AlpA

DNA sequence :
ATGCGAGGTGCCACCAATTCGATGACGATTGCTCAGGCCACGGAATTCGCCGTGTTCCTGCGCATCGGTGCCGTCACAAA
GCTCACTGGTCTCGGCCGTTCGACAATCTACCGCCTCATGGCCGAAGCCAAGTTTCCGACGCCGGTGCGACTCTCGAGTC
GTGCGATCGCGTGGCGTCGTGCCGACCTCGACCGGTGGAGTGCTGAACGACCGCCGGCCTCTCATTGA

Protein sequence :
MRGATNSMTIAQATEFAVFLRIGAVTKLTGLGRSTIYRLMAEAKFPTPVRLSSRAIAWRRADLDRWSAERPPASH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 2e-09 51