Gene Information

Name : Lcho_0764 (Lcho_0764)
Accession : YP_001789802.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 823160 - 824128 bp
Length : 969 bp
Strand : +
Note : KEGG: mpt:Mpe_A3002 putative porphobilinogen deaminase protein; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase

DNA sequence : 
ATGCGGGACAATGCGGGCATGAGCACCTTGCCCCAGCCCTGCATCATCGCCACCCGCGAAAGCCGCCTCGCCCTCTGGCA
GGCCGAACATGTCCGTGACCTGCTGCAACGCCGCCACGGCGCGGTGGTCGAGCTGCTCGGCATGACGACCCGCGGCGACC
AGATCCTCGACCGCGCCCTGTCCAAGGTCGGCGGCAAGGGGCTGTTCGTCAAGGAGCTGGAAGTCGCGCTCGAAGAAGAC
CGCGCCCAGCTCGCCGTGCATTCGCTCAAGGACGTGCCGATGGAGCTGCCCGAGGGTTTCGTGCTGGCCGCCGTGCTGGA
GCGCGAAGACCCGCGCGATGCCTGGGTCTCGAACCACTACGACGACGTCGCCAGCCTGCCGCAGGGCGCGCGCGTCGGCA
CCTCGAGCCTGCGCCGCATCGTGCAGCTGAAGGCGGTGCGCCCCGACCTCGAGATCCACGCGCTGCGCGGCAACCTCGAC
ACCCGGCTGCGCAAGCTCGACGAAGGCCTGTACGACGGCATCGTGCTGGCCGCGGCCGGGCTCAAGCGGCTCGGCCTGGC
GCAGCGCATCCGTAGCGTCATCGATCCGGCCGTGATGCTGCCGGCCGCCGGCCAGGGCGCGCTCGGCATCGAGGTGCGCG
CCGATGCGTCGGCGTTGCGCGAGGCGCTGGCCGCCATGACCGACGCACCGACCTGGCTCGCGGTGCATGCCGAACGGGCG
GTCTCGCGTGCACTGGGCGGCAGCTGCAGCATGCCGCTGGCGGCGTTCGCGCAGTGGCAGGGCGCGCAGCTTCATCTCGA
GGCGCGTCTCGGCCATCCGGAAGACGCCAGCGTGGCGCTGATCGTGGCGAGCGCCGAGGCTGCCGTCACCGACACCGCCG
GCGCCGAGGCGCTCGGCCTGGCGGTGGTGGCGCGTCTGCGTGCCGGCGGTGGCGAGGCCTTGCTGGCGGCGCTGCCGGTG
GCGTCCTGA

Protein sequence : 
MRDNAGMSTLPQPCIIATRESRLALWQAEHVRDLLQRRHGAVVELLGMTTRGDQILDRALSKVGGKGLFVKELEVALEED
RAQLAVHSLKDVPMELPEGFVLAAVLEREDPRDAWVSNHYDDVASLPQGARVGTSSLRRIVQLKAVRPDLEIHALRGNLD
TRLRKLDEGLYDGIVLAAAGLKRLGLAQRIRSVIDPAVMLPAAGQGALGIEVRADASALREALAAMTDAPTWLAVHAERA
VSRALGGSCSMPLAAFAQWQGAQLHLEARLGHPEDASVALIVASAEAAVTDTAGAEALGLAVVARLRAGGGEALLAALPV
AS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-57 57
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-57 57