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Name : Lcho_0705 (Lcho_0705) Accession : YP_001789745.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 754030 - 754755 bp Length : 726 bp Strand : - Note : KEGG: mpt:Mpe_A2705 tRNA nucleotidyltransferase; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 DNA sequence : ATGAGTTCCACCCGCCCCCTCGGCCGCGCCGCCGACGCCCTGCGCCCGGTGCGCATCACCCGCAGCTACACCAAACACGC CGAGGGCTCGGTGCTGATCGAGTTCGGCGACACCCAGGTGCTGTGCACCGCCTCGGTCGAAGAAAAGGTGCCGCCGCACA AGAAGGGCAGCGGCGAGGGCTGGGTCACGGCCGAATACGGCATGCTGCCGCGTGCCACCCACACCCGCAGCGCGCGTGAA GCCGCCAAGGGCAAGCAGAGCGGGCGCACGCAGGAGATCCAGCGCCTGATCGGCCGCTCGCTGCGCTGCGTGTTCGACCT CGCCGCTTTGGGCGAGCGCAGCATCCTGATCGACTGCGACGTGCTGCAGGCCGACGGCGGCACGCGCACCGCGTCGATCA CCGGCGCCTTCGTGGCTGCGCACGACGCGGTGCAGGGCCTGATCGCGCAGGGCAAGCTCAAGCGCAGCCCGATCCGCGAC TTCGTCGCCGCGGTGTCGGTCGGCATCCTCGACGGCGTGGCGCTGCTCGACCTCGAATACGTCGAGGACTCGGCCTGCGA CACCGACATGAACATCGTCATGACCGGCGCGGGCGGCTTCGTCGAAGTTCAAGGCACGGCCGAAGGTGTCGCCTTCAGCC GCGCCGAGATGGACCAGCTGCTGGCGCTCGGCAGCGCCGGCATCGCCGAGCTGGTGGCGGCGCAGAAGGCCGCGCTGGGA GTCTGA Protein sequence : MSSTRPLGRAADALRPVRITRSYTKHAEGSVLIEFGDTQVLCTASVEEKVPPHKKGSGEGWVTAEYGMLPRATHTRSARE AAKGKQSGRTQEIQRLIGRSLRCVFDLAALGERSILIDCDVLQADGGTRTASITGAFVAAHDAVQGLIAQGKLKRSPIRD FVAAVSVGILDGVALLDLEYVEDSACDTDMNIVMTGAGGFVEVQGTAEGVAFSRAEMDQLLALGSAGIAELVAAQKAALG V |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 7e-63 | 59 |
