Gene Information

Name : Lcho_0704 (Lcho_0704)
Accession : YP_001789744.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : putative deoxyribonucleotide triphosphate pyrophosphatase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : -
Position : 753389 - 754027 bp
Length : 639 bp
Strand : -
Note : HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine

DNA sequence :
ATGCGGCTCGTGCTCGCCTCCAACAACGCCAAGAAGCTCAAGGAGCTGGGCACGCTGCTGGCGCCGGCCGGTGTCGAACT
GGTCACGCAAGGCAGCCTGGGCATCGCCGAGGCCGAGGAGCCGCACCACACCTTCATCGAGAACGCGCTCGCGAAAGCCC
GCCACGCCGCGGCGGCGAGCGGCCTGCCGGCGATCGCCGACGACTCGGGCCTGTGTGTCGACGCGCTCGGCGGCCAGCCG
GGCGTGCAGTCGGCGCATTACGCCACGCTCGATCCGGCCGACATCGACGGACTGGCGCGCGAGGCGCTGCGCGAACGGCA
GGACGCCGCCAACAACCGGCGCCTGCTGAGCGCGCTGGACGGCCAGGCCAACCGGCGCGCCCGCTTCGTCTGCACGCTGG
TGGCGATCCGCTCGGCCGACGATCCCGAACCGCTGGTCGCGCTGGGCCGCTGGGAAGGCGAACTGCTGACCGGATTGCGC
GGCAGCGGCGGCTTCGGCTACGACCCGCTGCTGTCGATCCCGGCGCTGGACGCGACCGTCGCGCAACTCGACGCCGAGAC
CAAGAACCGCCACAGCCATCGCGCGCTGGCCGCCGAGCAGATGGTCGCGCTGATGCGCAGCGCCTGGCACCTCGCCTGA

Protein sequence :
MRLVLASNNAKKLKELGTLLAPAGVELVTQGSLGIAEAEEPHHTFIENALAKARHAAAASGLPAIADDSGLCVDALGGQP
GVQSAHYATLDPADIDGLAREALRERQDAANNRRLLSALDGQANRRARFVCTLVAIRSADDPEPLVALGRWEGELLTGLR
GSGGFGYDPLLSIPALDATVAQLDAETKNRHSHRALAAEQMVALMRSAWHLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 1e-17 42