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Name : Lcho_0692 (Lcho_0692) Accession : YP_001789732.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 742538 - 743833 bp Length : 1296 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATCGACATCACCCTGCTGCGCAAAGACCTCGACGCCGTGCTGGCGCGCCTGTCCGCCCGCAAGAACCCGCAGCCGTT TCTCGACGCCGAGCGTTTCCGCGCGCTCGAAGCCGAGCGCCGGACGTTGCAGAGCAGCACCGAGGACCTGCAGGCGCGGC GCAACCAGCTGTCCAAGCAGATCGGCCACCTGAAGGCCAAGGGCGGCGACGTGGCGCCGGTGATGGACGAGGTCGGTGGC ATCGGCGACACGCTCAAGGCCGGCGCCGAGCGGCTCGAGCAGATCCAGGGCGAACTCGGCCTGATGCTGATGCACGTGCC CAACCTGCCGCAGGCCGACGTGCCGGTGGGCGCGGATGAAACCGCCAACCTCGAGGTGCGGCGCTGGGGCAGCCCGCGCG AATTCGATTTCACGGTGCGCGATCACGTCGACCTCGGCGCACCGCTGGGCCTCGATTTCGAGACCAGCGCCAAGCTCTCG GGCGCGCGCTTCAGCTTCCTGAAGGGCCCGGCGGCGCGGCTGCACCGCGCGCTCGCCCAGTTCATGCTCGACGTGCAGAC GCAGGAACACGGCTACACCGAGTGCTACACGCCCTACATCGTCAACCGCGAAGTGCTCGAAGGCACCGGCCAGCTGCCCA AGTTCAAGGAAGACATGTTCTGGGTCTCGCGCGGCGGCGACGAAACCCAGCCCGAGCAGTACCTGATCTCGACCTCCGAG ATCTCGCTCACCAACAGCGTGCGCGAGCAGGTGCTGGCGGCCGACCAGCTGCCGATCAAGCTGACCGCGCACAGCCCATG TTTCCGCTCCGAAGCCGGCTCGGCCGGGCGCGACACCCGCGGCCTGATCCGCCAGCACCAGTTCGACAAGGTCGAGATGG TGCAGATCACCACGCCCGAGCAGAGCGACGCCGCGCTCGAATCGATGGTCGGCCACGCCGAAGCGGTGCTGCAGAAGCTC GGCCTGCCGTACCGCGTGCTGCTGCTGTCGACCGGCGACATGGGTTTCGGCTCGGCCAAGACCTATGACCTGGAAGTGTG GGTGCCGGCGCAAGCCACCTACCGCGAGATCAGCTCCTGCAGCAACTGCGAGGCCTTCCAGGCCCGGCGCATGCAGACGC GCTTCAAGAACGCGCAGGGCAAGAACGAGTTCGTGCACACGCTCAACGGCTCCGGCCTGGCGGTGGGCCGCACGCTGGTG GCGGTGCTCGAGAACTACCAGAACGCCGACGGCAGCATCACGGTGCCGGAAATTTTGCGTCCTTATCTCGGCGGACTGCT TGAATTGCGCGCCTGA Protein sequence : MIDITLLRKDLDAVLARLSARKNPQPFLDAERFRALEAERRTLQSSTEDLQARRNQLSKQIGHLKAKGGDVAPVMDEVGG IGDTLKAGAERLEQIQGELGLMLMHVPNLPQADVPVGADETANLEVRRWGSPREFDFTVRDHVDLGAPLGLDFETSAKLS GARFSFLKGPAARLHRALAQFMLDVQTQEHGYTECYTPYIVNREVLEGTGQLPKFKEDMFWVSRGGDETQPEQYLISTSE ISLTNSVREQVLAADQLPIKLTAHSPCFRSEAGSAGRDTRGLIRQHQFDKVEMVQITTPEQSDAALESMVGHAEAVLQKL GLPYRVLLLSTGDMGFGSAKTYDLEVWVPAQATYREISSCSNCEAFQARRMQTRFKNAQGKNEFVHTLNGSGLAVGRTLV AVLENYQNADGSITVPEILRPYLGGLLELRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-101 | 54 |
