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Name : Lcho_3872 (Lcho_3872) Accession : YP_001792891.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Unknown Product : NusG antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 4345559 - 4346125 bp Length : 567 bp Strand : - Note : TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: mpt:Mpe_A3456 transcription antitermination protein NusG DNA sequence : ATGAGTGATATCCAGGCGGTCGCCCCGGCGGCAAACCCGATGCGTTGGTACGTGGTTCATGCTTATTCGGGCATGGAGAA GGCCGTCGAGCGCAATCTGCGCGAGCGCATCGACCGTTCCGGCATGCAGGCCAAGTTCGGTCGCATCCTCGTGCCGACCG AAGAGGTCGTCGAGATGAAGAACGGCAAGAAGGCCGTGACCGAGCGCCGCTTCTTCCCGGGTTATGTGCTGGTCGAGATG CTGATGGATGACGAGTCCTGGCACCTGGTCAAGAACACCAGCAAGGTGACGGGTTTCGTCGGTGGTGCCAAGAACCGCCC CACGCCGATCTCGGAAGACGAGGTCATGAAGATCGTCACCCAGATGCAGGAAGGCATCGAGAAGCCCCGGCCCAAGGTCG AGTGGGAAGTGGGTGAAGTGGTGCGTGTCAAGGAAGGCCCTTTCACCGACTTCAACGGATCGGTCGAAGAGGTCAACTAC GACAAGAACAAGGTGCGGGTCTCGGTCACGATCTTTGGCCGTGCCACGCCGGTGGAGCTCGATTTCCACCAGGTCGAAAA GGTCTGA Protein sequence : MSDIQAVAPAANPMRWYVVHAYSGMEKAVERNLRERIDRSGMQAKFGRILVPTEEVVEMKNGKKAVTERRFFPGYVLVEM LMDDESWHLVKNTSKVTGFVGGAKNRPTPISEDEVMKIVTQMQEGIEKPRPKVEWEVGEVVRVKEGPFTDFNGSVEEVNY DKNKVRVSVTIFGRATPVELDFHQVEKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 1e-50 | 56 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 1e-50 | 56 |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 2e-29 | 41 |
