Gene Information

Name : Lcho_3837 (Lcho_3837)
Accession : YP_001792856.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : ATP-dependent protease peptidase subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG5405
EC number : -
Position : 4301312 - 4301848 bp
Length : 537 bp
Strand : +
Note : heat shock protein involved in degradation of misfolded proteins

DNA sequence :
ATGGAGTCCTTCCACGGCACCACGATCCTCAGCGTGAGGCGCGGCGAGCAGGTCGCCATGGGCGGTGATGGCCAGGTCAC
CCTGGGCCACATCGTCGTCAAGGCCAGCGCACGCAAGGTGCGCCGGCTGTATCGCGAACAGGTGCTGGCCGGTTTTGCCG
GCGCCACCGCCGATGCCTTCACGCTGTTCGAGCGTTTCGAATCCAAGCTCGAGAAACACCAGGGCCATCTGGTGCGCGCC
GCCGTCGAACTGACGCGCGACTGGCGCACCGACCGCGTGCTGCGCCGCCTCGAGGCCATGCTGGCGGTGGCCGACCGCAG
CGCCTCGCTGATCATCACCGGCAACGGCGACGTGCTCGAGCCCGAGTACGGCATCGTCGCGATCGGATCCGGTGGCGCCT
ACGCCCAGGCGGCCGCCCGCGCCATGCTGCAGCACACCGAACAGTCGCCGGCCGACATCGTCAAGCGTTCGCTCGAGATC
GCCGGCGACCTGTGCATCTACACCAACCAGTCGCACACCATCGAGACCCTCGAATGA

Protein sequence :
MESFHGTTILSVRRGEQVAMGGDGQVTLGHIVVKASARKVRRLYREQVLAGFAGATADAFTLFERFESKLEKHQGHLVRA
AVELTRDWRTDRVLRRLEAMLAVADRSASLIITGNGDVLEPEYGIVAIGSGGAYAQAAARAMLQHTEQSPADIVKRSLEI
AGDLCIYTNQSHTIETLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslV YP_003728752.1 protein HslV Not tested cag PAI Protein 4e-25 49