Gene Information

Name : Lcho_3763 (Lcho_3763)
Accession : YP_001792782.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4221663 - 4222394 bp
Length : 732 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_4253 two component transcriptional regulator, winged helix family

DNA sequence :
GTGACGCTGCGCGTGCTGCTGGTCGAGGACGACCGCGAGCTGCGCACCACGCTGCGCGACGCGCTCACGGTCGAGGGTTA
CCAGGTGCTGACCGCCGCCAGCCTGTCCGAGGGGCTGGCGCTGGTCGGCCACGCCGGCAGGCCGGGGCGGCTGGCCGACG
AGCCGGGCATCGACCTGATCGTGCTCGACCTCGGCCTGCCCGACGGCGACGGCGAGACCCTGCTCGTCAACCTGCGACGC
CGCCAGGCGCTGCCGGTGCTGGTGATCTCGGCGCGCCAGGCCGAGGGCCAGAAGATCCGCCTGCTCGACGCCGGCGCCGA
CGACTACCTCGTCAAGCCCTTCAGCGTCGGCGAGCTGCTGGCGCGGCTGCGGGTGGCGCTGCGCCACCGCGGCACCACGG
TGCGGGCGGCGCTCACGCACTACCGGGGCGAGGGCGTGGAGATCGATCTGGTCCGGCAGACGGTGCAGCGCGACGGCCAG
CCGGTGCACCTGACGCCCACCGAGTTCAAGCTGCTCGCCCGGCTGGTGCGCAGCGCCGGCCAGGTGGTGACGCACCGCCA
GCTGCTGGCCGACGTGTGGGGGGCCGAGTACGTGTCCCACACGCATTACCTGCGGCTCTACATGGCGCAGCTGCGCGCCA
AGCTGGAGCCCGAACCGGCCGAGCCGCGCCTGATGCTGACAGAACCGGGCGTGGGTTACCGGCTGGTCGAGCCGGCGCAG
GAATCGCAGTAG

Protein sequence :
MTLRVLLVEDDRELRTTLRDALTVEGYQVLTAASLSEGLALVGHAGRPGRLADEPGIDLIVLDLGLPDGDGETLLVNLRR
RQALPVLVISARQAEGQKIRLLDAGADDYLVKPFSVGELLARLRVALRHRGTTVRAALTHYRGEGVEIDLVRQTVQRDGQ
PVHLTPTEFKLLARLVRSAGQVVTHRQLLADVWGAEYVSHTHYLRLYMAQLRAKLEPEPAEPRLMLTEPGVGYRLVEPAQ
ESQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 6e-32 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 4e-32 41