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Name : Lcho_3753 (Lcho_3753) Accession : YP_001792772.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 4209745 - 4211772 bp Length : 2028 bp Strand : - Note : TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: rme:Rmet_1513 transketolase DNA sequence : ATGAACACGACTCTTCCTCTGGCCACCGAGATGGCCAACTCATTGCGCGCACTGGCGATGGACGCGGTGCAGAAGGCCAA CTCCGGCCACCCCGGCGCGCCGATGGGCATGGCCGAGATGGCGGTGGCGCTGTGGGGCCGCCATCTGCGCATCAACCCGG CCGATCCGCATTGGCCCGACCGCGACCGTTTCGTGCTGAGCAATGGCCACGCCTCGATGCTGCTGTACGCGCTGCTGCAC CTGAGCGGCCACGACCTGTCGATCGATGACCTGAAGGCCTTTCGTCAATTGCGCAGCCGCACGCCGGGCCACCCGGAAGT CGGCTTGACGCCGGGTGTCGAAACCACCACCGGCCCGCTCGGCCAGGGCCTGACGAATGCGGTCGGTTTTGCCTTGGCCG AGAAGCTGCTGGCGCGCGAATTCAATCGCCCGGGCCATGACATCGTCGATCACCGGACCTATGTGTTTCTCGGTGACGGC TGCCTGATGGAAGGCATCAGCCAGGAGGCGATCTCGCTGGCCGGCGTGTGGGGTCTGAACAAGCTGGTGGCGCTGTACGA CGACAACGGCATCTCGATCGACGGCCCGGTGCAGGGCTGGTTTGCCGACGACACCGCCTTGCGTTTCAAGGCCTGCGGCT GGAACGTGATCGGCACGCTCGATGGCCACGATGTCGACGCCGTCGACCAGGCGATCGCGCAGGCGCAGCACAGCAGCGAG CGGCCGACGCTGATCATCTGCCGCACCCGCCTCGGTCACGGTTCACCGAATCGCGCCAACACCGCCCGCGCGCACGGCGA GCCGCTCGGCGCCGCCGAGATCGCCGCCACCCGTGCGGCGATCGGCTGGCCGCATGCGCCGTTCGAGGTGCCCGAATCGC TGCGAGCGGCCTGGGATGCACGTGAGCGCGGTGCTGCCCTGCAGCAGCAATGGGCCGAGCGCCTGACGGCTTATCGCGCC GCACACCCGGCGCTGGCGGCGGAGTTCGAGCGCCGTGTGCGCGGTGATCTGCCGGCCGATTTCGAGGAGACGCTGCTCAA CGCGATGCTGCAGTTCGGCCAGTCGCGCGACAGCGTGGCCAGCCGCAAGGCCTCGCAGCAGGTGCTCGCCGCGCTTGCGC CGCGTGTGCCCGAACTGCTCGGCGGATCGGCCGACCTGACGGGCTCGAACCTGACCGATTTCCCCGGCTGCGGCGCGGTG CGCGGCGGCGAGTTCGGCGGCCGCCACGTGCATTACGGCGTGCGCGAGTTCGGCATGGCCGCGATCATGAACGGCATCGC GCTGCACGGCGGCTTCATCCCGTACGGCGGCACCTTCCTGACCTTCAGCGACTACAGCCGCAACGCCGTCCGCATGGCCG CGCTGATGAAGCTGCGCGTGGTGCACGTGTTCACGCACGACTCGGTCGGCCTGGGTGAAGACGGCCCGACGCACCAGCCC GTCGAACACGCGGCGAGCCTGCGGCTGATCCCGGGGCTCGACGTCTGGCGCCCGTGCGACGCGGCCGAAACCGCGGTCGC CTGGACCCACGCGCTGCAGCAGGCGCAGCGGCCGAGCGCGCTGCTGCTGTCGCGCCAGAACCTGCCGGCGCAGCTGCGCG AGCCCGAGCAGCTGGTGGCGATCCGGCGCGGTGCTTATGTGCTGAGCGACCGGCCGCAGCCGCAGGCGGTGCTGCTGGCC ACCGGCTCCGAGGTCGGCCTGGCGATGGCGGCGCAGCAGTTGCTCGATGGCCGTGGCATCAGCGTGCGAGTGGTGTCGTT GCCGTGCACGACGCTGTTCGACCGGCAGGACCGCGCCTGGCGCGATGCGGTGCTGGGCCGCGGCCTGCCGCGGATCGGTG TCGAGGCGGGGGTGTCGCGCTGGTGGGGCCAGTACGGCTGTTGCGCCGCCTTGGGCATCGACCGCTTCGGCGAGTCCGGC CCGGGGCCGGCGGTGTTCGAGCACTTCGGCTTGACGGCCGCGGCGCTGGCCAGCCTGGTCGAACGCGAGATCGATGCCGC GCGAGCGCCGCTCGCCGCCAGCCTCTGA Protein sequence : MNTTLPLATEMANSLRALAMDAVQKANSGHPGAPMGMAEMAVALWGRHLRINPADPHWPDRDRFVLSNGHASMLLYALLH LSGHDLSIDDLKAFRQLRSRTPGHPEVGLTPGVETTTGPLGQGLTNAVGFALAEKLLAREFNRPGHDIVDHRTYVFLGDG CLMEGISQEAISLAGVWGLNKLVALYDDNGISIDGPVQGWFADDTALRFKACGWNVIGTLDGHDVDAVDQAIAQAQHSSE RPTLIICRTRLGHGSPNRANTARAHGEPLGAAEIAATRAAIGWPHAPFEVPESLRAAWDARERGAALQQQWAERLTAYRA AHPALAAEFERRVRGDLPADFEETLLNAMLQFGQSRDSVASRKASQQVLAALAPRVPELLGGSADLTGSNLTDFPGCGAV RGGEFGGRHVHYGVREFGMAAIMNGIALHGGFIPYGGTFLTFSDYSRNAVRMAALMKLRVVHVFTHDSVGLGEDGPTHQP VEHAASLRLIPGLDVWRPCDAAETAVAWTHALQQAQRPSALLLSRQNLPAQLREPEQLVAIRRGAYVLSDRPQPQAVLLA TGSEVGLAMAAQQLLDGRGISVRVVSLPCTTLFDRQDRAWRDAVLGRGLPRIGVEAGVSRWWGQYGCCAALGIDRFGESG PGPAVFEHFGLTAAALASLVEREIDAARAPLAASL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-180 | 58 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-170 | 56 |
