Gene Information

Name : Lcho_3626 (Lcho_3626)
Accession : YP_001792645.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Virulence
Product : UTP-glucose-1-phosphate uridylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : 2.7.7.9
Position : 4049836 - 4050702 bp
Length : 867 bp
Strand : -
Note : KEGG: mpt:Mpe_A1135 UTP--glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase

DNA sequence : 
ATGCAAGTCAAGAAGGCGATCTTTCCCGTCGCGGGCCTCGGAACCCGCTTCCTGCCGGCCACCAAGGCGCAACCCAAGGA
GATGCTGCCGGTGGTCGACAAGCCGCTGATCCAGTACGCGGTGGAGGAGGCCTACGCGGCTGGCGTGCGGGAGATGATCT
TCGTCACCGGCCGCCACAAGCGCCCGATCGAGGACCATTTCGACATGACCTTCGAGCTGGAAGTGGCGCTCGAGCAGGCC
AACAAGCTCGAACTGCTCGAGGTGGTGCGCAGCGTCAAGCCCAAGGACATGGAGTGCATCTACGTGCGCCAGGCTCAGGC
GCTGGGCCTGGGCCACGCGGTGCTGTGCGGCCAGCGGCTGGTCGGCAACGAGCCGTTCGCGGTCCTGCTGGCCGACGACC
TGATGATCGGCGAGCCGCCGGTGCTGGCGCAGATGGCCGAGCAGTACAAGGAGTGGCGCGCCTCGATCCTGGCGGTGCAG
GAGGTTCCGGCCGAGCACACCAAGCGCTACGGCATCGTCGCCGGCACGCTGGTCAACGACCGCGTGATGGACGTGACCAA
GATCGTCGAGAAGCCGTCGCCTGAAGAAGCGCCGTCACGCTGGGGCGTGGCCGGGCGCTACATCCTGACGCCGGGCGTGT
TCCACGAGATCGCCACCCAGCCGCGCGGCGTGGGCGGCGAGATCCAGCTGACCGACGGCATCGCCGCGCTGCTGCGCCGC
GAGAAGGTGTTCGCCTACCGCTACGAAGGCAAGCGCTACGACTGCGGCAGCAAGGAAGGCTGGCTGCAGGCCAACGTCGA
GCTGGCCCTGCAGCACCGCGAACTGGGCGACCACTTCCGCAGCTATCTGCGCCAGCTCGAGTTCTGA

Protein sequence : 
MQVKKAIFPVAGLGTRFLPATKAQPKEMLPVVDKPLIQYAVEEAYAAGVREMIFVTGRHKRPIEDHFDMTFELEVALEQA
NKLELLEVVRSVKPKDMECIYVRQAQALGLGHAVLCGQRLVGNEPFAVLLADDLMIGEPPVLAQMAEQYKEWRASILAVQ
EVPAEHTKRYGIVAGTLVNDRVMDVTKIVEKPSPEEAPSRWGVAGRYILTPGVFHEIATQPRGVGGEIQLTDGIAALLRR
EKVFAYRYEGKRYDCGSKEGWLQANVELALQHRELGDHFRSYLRQLEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 1e-60 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lcho_3626 YP_001792645.1 UTP-glucose-1-phosphate uridylyltransferase VFG0964 Protein 4e-61 46