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Name : Lcho_3581 (Lcho_3581) Accession : YP_001792600.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : - Position : 3998123 - 3999538 bp Length : 1416 bp Strand : + Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mpt:Mpe_A2076 glutamate--ammonia ligase DNA sequence : ATGGCCAAGACCGTCGCCGACGTGATGAACATGGTGAAGGAAAACGAAGTCAAGTTCGTCGACTTCCGTTTCACCGACAC CCGCGGCAAGGAACAGCACGTCACCGTGCCTGTTTCCCATTTCGATGAAGACAAGTTCACGTCGGGTCACGCCTTCGACG GTTCGTCGATCGCCGGCTGGAAGGGCATCGAAGCCTCGGACATGCAGCTCATGCCCGACCCGAACACGGCCAACATCGAT CCGTTCTTCGAAGAGCCGACGATGATCCTGACCTGCGACGTGGTCGAGCCCGGTGACGGCAAGCCCTACGAGCGCGATCC GCGTTCGCTGGCCAAGCGCGCCGAGGCCTACATGAAGTCCACCGGCCTGGGCGACACCGCCTACTTCGGCCCGGAACCCG AGTTCTTCGTCTTCGACAGCGTGCGCTGGAACGCCGACATGTCGGGCTGCTTCGTCTCGATCGAGTCGGAAGAAGCCGCC TGGAACACCGGCAAGGACTACGAGCACGGCAACAAGGGCTTCCGCCCCGCCGTCAAGGGTGGCTACTTCCCCGTGCCGCC GGTCGACTCGTCGCAAGACATGCGCTCGGAGATGTGCCTGATCCTCGAATCGCTGGGCATCCCGGTCGAAGTGCATCACC ACGAAGTGGCGACCGCCGGCCAGATGGAACTGGGCACCAAGTTCAGCACGCTGATCCAGCGCGCCGACTGGGTCCAGCTG CAGAAGTACGTGATCCACAACGTCGCGGCCGCCTACGGCAAGACCGCCACGTTCATGCCCAAGCCGATCGTCGGTGACAA CGGCAGCGGCATGCACGTGCACCAGTCGGTCTGGAAGGACGGCAAGAACCTGTTCGCCGGTGACGGCTACGCCGGCCTGT CGGACTTCGCGCTGTACTACATCGGCGGCATCATCAAGCACGCCCGTGCGCTCAACGCCATCACCAACCCCGGCACCAAC AGCTACAAGCGCCTGGTCCCCGGCTTCGAAGCCCCGGTGAAGCTGGCCTACTCGGCCAAGAACCGCTCGGCCTCGATCCG CATCCCGCACGTCGCCAATCCGAAGGGCCGCCGCGTCGAAGCGCGTTTCCCGGATCCGCTGATGAACCCGTACCTGGGTT TTGCCGCGCTGCTGATGGCCGGTCTGGACGGCGTGGAAAACAAGATCCATCCGGGCGAGCCCGCCTCGAAGGACCTGTAC CACCTGCCGCCGGAAGAAGACGCGAAGATCCCGACCGTGTGCTCGAGCCTGGAACAGGCCCTCGAGTATCTGGACAAGGG CCGCAGCTTCCTGACCAAGGGTGGCGTGTTCACCGACTCGTACCTCGATGCCTACATCGAGCTGAAGATGCAGGAAGTCA CGCGCATGCGCATGACCACGCACCCGATCGAGTTCGACATGTACTACACGCTGTGA Protein sequence : MAKTVADVMNMVKENEVKFVDFRFTDTRGKEQHVTVPVSHFDEDKFTSGHAFDGSSIAGWKGIEASDMQLMPDPNTANID PFFEEPTMILTCDVVEPGDGKPYERDPRSLAKRAEAYMKSTGLGDTAYFGPEPEFFVFDSVRWNADMSGCFVSIESEEAA WNTGKDYEHGNKGFRPAVKGGYFPVPPVDSSQDMRSEMCLILESLGIPVEVHHHEVATAGQMELGTKFSTLIQRADWVQL QKYVIHNVAAAYGKTATFMPKPIVGDNGSGMHVHQSVWKDGKNLFAGDGYAGLSDFALYYIGGIIKHARALNAITNPGTN SYKRLVPGFEAPVKLAYSAKNRSASIRIPHVANPKGRRVEARFPDPLMNPYLGFAALLMAGLDGVENKIHPGEPASKDLY HLPPEEDAKIPTVCSSLEQALEYLDKGRSFLTKGGVFTDSYLDAYIELKMQEVTRMRMTTHPIEFDMYYTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 2e-98 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Lcho_3581 | YP_001792600.1 | glutamine synthetase | VFG1399 | Protein | 2e-104 | 50 |
