Gene Information

Name : Lcho_3562 (Lcho_3562)
Accession : YP_001792581.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 3981420 - 3982154 bp
Length : 735 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpe:BP3082 putative transport protein ATP-binding

DNA sequence : 
ATGACGACGCAGCCCTGCGCGCTGAGCGTGCGTGACCTGACGCTGGCGCACCGCGGTCGCACCGCGCTGATCGGCCTGAA
CGGGCGTTTCGAGCCCGGTGTCGCCACCGCCGTCATCGGCCCGAACGGCGCCGGCAAGAGCAGCCTGCTGGCCGCGCTGG
CCGGCCAGTTGCGGCCGACCGCCGGCCAGATCGAGCGCGACCCGCGCAGCCGCATCGCCTATCTGCCGCAGCAGACCGCG
TTCGACCGCAGCTTTCCGGTCTCGGTGCACGATCTGGTGGCGATGGGCCTGTGGCCGCGGCTGGGCGCGTGGCGCCGCAT
CGACGCCTCGCACCGCGCGCTGATCGACGCCGCGCTGGCGCAGGTCGGCCTGGCCGATGCGGCCCGGCGGCCGGTCGCCG
AGCTGTCGGCCGGGCAGTGGCAGCGTGCCCTGTTCGCGCGCCTGCTGCTGCAGGACGCCGACGTGATCCTGCTCGACGAG
CCCTTCAACGCCGTCGACGAGCAGACCACCACCGACCTGCTGGCGCTGCTGGCGCAGTGGGTGGCGCAGGGCCGCACCGT
CATCGCGGTGCTGCACGACCTGGCGCAGGTGCGCCGCCATTTCGACCAGACCCTGATCCTGTCGGGCCAGCGCTGCCGCG
CCTGGGGCCCGACCGCCGAGGTGCTCGGCACGGTCGAGCCGTCCGCGGCCGTCGCCTGGCTGAACCCGTCCGCCCCCTGG
CTGCAAGCCGCCTGA

Protein sequence : 
MTTQPCALSVRDLTLAHRGRTALIGLNGRFEPGVATAVIGPNGAGKSSLLAALAGQLRPTAGQIERDPRSRIAYLPQQTA
FDRSFPVSVHDLVAMGLWPRLGAWRRIDASHRALIDAALAQVGLADAARRPVAELSAGQWQRALFARLLLQDADVILLDE
PFNAVDEQTTTDLLALLAQWVAQGRTVIAVLHDLAQVRRHFDQTLILSGQRCRAWGPTAEVLGTVEPSAAVAWLNPSAPW
LQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33755.1 putative ABC transporter ATP-binding protein Virulence PAI I 536 Protein 1e-28 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lcho_3562 YP_001792581.1 ABC transporter-like protein VFG1496 Protein 7e-29 43