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Name : Lcho_3323 (Lcho_3323) Accession : YP_001792346.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 3697462 - 3699174 bp Length : 1713 bp Strand : - Note : PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: btl:BALH_3635 oligo-1,6-glucosidase DNA sequence : ATGAAGCACGCATGGTGGAAAGAAAGCGTCGTCTACCAGATCTACCCGCGCAGCTTCGCTGACAGCGACGGCGACGGCAT CGGCGACCTCAACGGCATCACCGCGAAACTCGATCACCTGAAGACGCTGGGTGTCGACGTGGTGTGGCTGTCGCCGATCT ACCGCTCGCCCAACGACGACAACGGCTACGACATCAGCGACTACCGCGCCATCATGGCCGAGTTCGGCACGATGGCCGAT TTCGACACCATGCTGGCCGGCATGCACCAGCGTGGCATCAAGCTGATGATGGACCTGGTGGTCAACCACTGCTCGGACGA ACACGCCTGGTTCCAGGCCGCGCGCACGAGCCGCGACAACCCGTACCACGACTACTTCATCTGGCGCGACCCCAAGCCCG ATGGCTCGCCGCCCACGAACTGGGAGGCCGCCTTCAACGGCTCGGTGTGGGAGTGGAACGAGCCCACCGGCGAGTACTAC CTGCACATGTTCAGCAAGAAGCAGCCGGACCTGAACTGGGAGAACCCGCAGGTGCGCGCCGAGGTGCACGCGCTGATGCG CTTCTGGCTCGACAAGGGCGTCGACGGCTTCCGCATGGACGTCATCAACATGATCTCCAAGCCCTGGCGCGCCGACGGCA GCCTGCCCGACGCGCCGGTGGTGCGCGAGGGTTTCCTGCAGCCCGGTTTCGCGCTGACCTGCAACGGCCCGCGCCTGCTC GAATACTTGCGCGAGATGAAGGCCGAGGTGCTCGACCACTACGACACCATCACCGTCGGCGAGGCGCCGATGGCGACCAC GCAGCAGGGCCGCGAGATCAGCAACGAGCGCAGCGGCGCGCTCAACATGCTGTTCCAGTTCGAGCACATGGACCTCGACA GCGGACCGCTCGGCAAGTGGGATCTCAAACCGCTCGACCTGCGCGACCTCAAGCGCACCATGTCGCGCTGGCAGGACGAA CTGGCGGGCGAGGGCTGGAACAGCCTCTACCTGTCCAACCACGACCAGCCGCGGCCGGTGTCGCGCTTCGGGGATGACGG CGAGTTCCGCGTGGTGTCGGCCAAGATGCTCGGCACCTGGCTGCACATGCACCAGGGCACGCCCTACGTCTACCAGGGCG AAGAGCTCGGCATGACGAACGTGAAGTTCGCCCGCATCGACGACTACCAGGACATCGAGATCCTCAACATGTACCGGGTG GCCACCACCGAGCGGGGGCAGGACCCGGCGCAGGTGCTGGCCTCGATCCACGCCAAGGGCCGCGACAACGCGCGCACGCC GATGCCGTGGACGGCCGGGCCGAACGCCGGCTTCACCGGCGGCAAGCCGTGGTTGAAGCTCAATCCGAACTACCCGCAGA TCAACGCCGAGCAGGCGCTGGCCGATCCGGACTCGGTGTTCCATTACTACCGGCGCCTGATCGCGCTGCGCCACGCGCAC CCGATCGTGGTCTACGGCCGCTACGACCTGCTGCTGCCCGAGCACCCGCACATCTACGCCTACACGCGCACGCTCGGCGC CGAGCGCCTGCTGGTGGTGTGCAACTTCAGCCACGGCCAGCCGGTGTTCGAGCTGCCGGCCGACATCTTCCACAGCGGCA CCGAGCTGATGATCGCCAACTACCCCGTGCCGACCGAGCCGGCGAGCACCGAAGACCTGCGCGCCTTGCGCCTGCGCCCC TACGAGGCGCGCGTGATCCGCCTGCGCGCCTGA Protein sequence : MKHAWWKESVVYQIYPRSFADSDGDGIGDLNGITAKLDHLKTLGVDVVWLSPIYRSPNDDNGYDISDYRAIMAEFGTMAD FDTMLAGMHQRGIKLMMDLVVNHCSDEHAWFQAARTSRDNPYHDYFIWRDPKPDGSPPTNWEAAFNGSVWEWNEPTGEYY LHMFSKKQPDLNWENPQVRAEVHALMRFWLDKGVDGFRMDVINMISKPWRADGSLPDAPVVREGFLQPGFALTCNGPRLL EYLREMKAEVLDHYDTITVGEAPMATTQQGREISNERSGALNMLFQFEHMDLDSGPLGKWDLKPLDLRDLKRTMSRWQDE LAGEGWNSLYLSNHDQPRPVSRFGDDGEFRVVSAKMLGTWLHMHQGTPYVYQGEELGMTNVKFARIDDYQDIEILNMYRV ATTERGQDPAQVLASIHAKGRDNARTPMPWTAGPNAGFTGGKPWLKLNPNYPQINAEQALADPDSVFHYYRRLIALRHAH PIVVYGRYDLLLPEHPHIYAYTRTLGAERLLVVCNFSHGQPVFELPADIFHSGTELMIANYPVPTEPASTEDLRALRLRP YEARVIRLRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 5e-140 | 51 |
