|
Name : Lcho_3302 (Lcho_3302) Accession : YP_001792325.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3839 EC number : - Position : 3669607 - 3670611 bp Length : 1005 bp Strand : + Note : PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rle:pRL100256 putative ATP-binding component of ABC transporter DNA sequence : ATGCATGACGTCCGCCTCTCCGCCATCCGCAAGTCGTACACCTCCGGCACCACGGTGATCCCGGGGCTCGACCTGGAGAT CCCCGCGGGCTCCTTCACCGTGCTGGTCGGCCCGTCGGGCTGCGGCAAGTCGACGCTGCTGCGCATGGTCGCGGGGCTGG AGTCGGTCAGCGGCGGCCAGATCCTGATCGGCGGCCGCGACGTGACCCACCTGGAGCCGGCCGATCGTGGCATCGCGATG GTGTTCCAGTCGTACGCGCTCTACCCGCACATGACGGTGGCCGAAAACATCGGCTTCCCGCTGACCATCGCGCGCCGGCC CAAGGCCGAGATCGACGCGGCGGTCAAGAAGGCCGCCGACGTGCTGCAGCTCGGCCCCCTGCTCGACCGCACGCCCAAGG CGCTGTCGGGCGGCCAGCGCCAGCGCGTGGCGATCGGCCGCGCGATCGTGCGCAACCCGTCGGTGTTCCTGTTCGACGAG CCGCTCTCCAACCTCGACGCCTCGCTGCGCGGGCAGATGCGCGTCGAGCTGGCCGACCTGCACCGCAAGATCGGCGCGAC CATGATCTACGTGACGCACGACCAGGTCGAGGCGATGACCATGGCCGACCAGATCGTCGTGCTCAACAAGGGCCACATCG AGCAGGCCGGCTCGCCGATGGACCTGTACCGCGAGCCGGCCACGCCCTTCGTCGCCGGCTTCCTGGGCTCGCCCAACATG AACCTGATCGAAGGCGCGCTGGCCCGCGAGATGGGCTGCGAGGTCTACGGCATCCGCCCCGAGCACCTCGACATCAGCCG CGACAGCGGCCGCTGGCCGGCCACCGTGCACCACATCGAACACCTGGGCGCCGACTGCATCGTCTACGCCGACGTGCGTG GCGTCGGCACGCTGACGGTGCGCGCCGACGGCGAACAGCCCGGCCTGGCGGTCGGCCAGACCATCCACCTGAGCCCGCGC GCCGGCTTCGAGCACCGCTTCAGCGGCGGCCGGCGGGTGAACTGA Protein sequence : MHDVRLSAIRKSYTSGTTVIPGLDLEIPAGSFTVLVGPSGCGKSTLLRMVAGLESVSGGQILIGGRDVTHLEPADRGIAM VFQSYALYPHMTVAENIGFPLTIARRPKAEIDAAVKKAADVLQLGPLLDRTPKALSGGQRQRVAIGRAIVRNPSVFLFDE PLSNLDASLRGQMRVELADLHRKIGATMIYVTHDQVEAMTMADQIVVLNKGHIEQAGSPMDLYREPATPFVAGFLGSPNM NLIEGALAREMGCEVYGIRPEHLDISRDSGRWPATVHHIEHLGADCIVYADVRGVGTLTVRADGEQPGLAVGQTIHLSPR AGFEHRFSGGRRVN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-38 | 42 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 9e-39 | 42 |
