Gene Information

Name : Lcho_3119 (Lcho_3119)
Accession : YP_001792144.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Resistance
Product : protein tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 3449737 - 3450243 bp
Length : 507 bp
Strand : -
Note : PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bmu:Bmul_6164 protein tyrosine phosphatase

DNA sequence :
ATGACCACACACGTTCTCATCCTCTGCACCCACAACTCGGCGCGCAGCGTGCTGTCCGAGGGCATGCTCAATCATTGGGC
CGCCAAGCTGGGCCTTGACGTGCAAGCCCACAGTGCGGGCAGTGCGCCGAGTGGCCGCATCAATGCGTTCGCACTCGAAG
CGCTCCAGCGTGCCGGCATCGATACCCGCGCCTACCGCAGCAAGAGCTGGGACGAGTTCAGCACCGACGGCGCGCCGCCG
CTGTCGATCGTCATCACCGTGTGCGACAGCGCGGCCGCAGAGAGCTGCCCGGTGTTCTTCGGCGGCAGCGCGGGCCAGCC
GGTCAAGGTGCATTGGGGCTACCCCGACCCGTCCAACGCCGAAGGCGGTGACGAGGGCAAGCGCCGCGCCTTCGAGCTGA
CGCGCCAGGCGATCGGCTACCGGATGCTGCAACTGCTGGCCTTGCCGCTGGCGACGATGGACCGCGCCGCACTGCAGGCC
GCCCTGGTCGAGATCGGCCGCAGCTGA

Protein sequence :
MTTHVLILCTHNSARSVLSEGMLNHWAAKLGLDVQAHSAGSAPSGRINAFALEALQRAGIDTRAYRSKSWDEFSTDGAPP
LSIVITVCDSAAAESCPVFFGGSAGQPVKVHWGYPDPSNAEGGDEGKRRAFELTRQAIGYRMLQLLALPLATMDRAALQA
ALVEIGRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0234 YP_002232865.1 putative arsenate reductase Not tested BcenGI11 Protein 4e-55 76
arsC AFC76434.1 ArsC Not tested AbaR5 Protein 6e-19 42
arsC CAJ77017.1 arsenate reductase Not tested AbaR1 Protein 4e-19 42