Gene Information

Name : Lcho_3091 (Lcho_3091)
Accession : YP_001792116.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 3422735 - 3424165 bp
Length : 1431 bp
Strand : +
Note : catalyzes the formation of arginine from (N-L-arginino)succinate

DNA sequence :
ATGAGCACCAATCAACTCGACACCAAATCCCAGGCCTGGTCGGCGCTGTTCTCCGAGCCGATGAGCGAGCTGGTCAAGCG
CTACACCGCCAGCGTCTTCTTCGACAAGCGGCTCTGGCAGGCCGACATCGCCGGCAGCCTGGCGCACGCCGAGATGCTGG
CCGCGCAACAGATCATCGGCGCGCAGGACCTGGCCGACATCCAGCGCGGCATGGCGCAGATCACGCAGGAGATCGAATCC
GGCGCCTTCGAGTGGAAGCTCGAACTCGAGGACGTGCACCTCAACATCGAGGCGCGCCTGACGCAGCTGGTTGGCGACGC
CGGCAAGCGCCTGCACACCGGACGCAGCCGCAACGACCAGGTCGCCACCGACGTGCGGCTGTGGCTGCGCGGCGAGATCG
ACGCCACCGCCGTGCTGCTGGCCGACATGCAGCGCGCGCTGGTGCATGTGGCGTCGAACAACGTCGACGTCATCCTGCCC
GGCTTCACGCACCTGCAGGTGGCTCAGCCGGTGAGCTTCGCGCACCACCTGCTGGCCTATGTGGAGATGTTCGCGCGTGA
CGCAGAGCGCCTGGCCGACTTGCGCAAGCGCGTCAATCGCCTGCCGCTGGGCTCGGCCGCGCTGGCCGGCACCAGCTACC
CGCTCGACCGCGAGCGCGTGGCGCGCACGCTGGGTTTCGATGGCGTCTGCCAGAACAGCCTCGATGCCGTGAGCGACCGC
GACTTCGCGATCGAGTTCACCGGCTTCGCCACGCTGGTGATGATCCACGTCTCGCGCATGGCCGAGGAAATCGTGCTGTG
GATGAGCCAGAACTTCGGTTTCATCAACCTGAGCGACCGCTACTGCACCGGCAGTTCGATCATGCCGCAGAAGCGCAACC
CCGACGTCGCCGAGCTGGCGCGCGGCAAGAGCGGCCGCGTGGTCGGCCACCTGATGGGCCTGATCACCTTGATGAAGGGC
CAGCCGCTGGCCTACAACAAGGACAACCAGGAAGACAAGGAGCCGCTGTTCGACACCGTCGACACGGTCAAGGACACGCT
GCGCATCATGGCCGAGATGATCGGCGGCGAAGTGGCGGCCGACGGCAGCCGCTCGGGCGGCCTGACCGTCAAGGCCGAGG
CGATGGAACGCGCCGCGCTGCGCGGCTATGCCACCGCCACCGATCTGGCCGACTACCTGGTCAAGAAGGGCCTGCCGTTC
CGCGACGCCCACGAGGTGGTGGCGCACGCGGTCAAGGACGCCATCGCGCTGGGCAAGGACCTGTCCGAACTGCCGCTCGA
AACGCTGCAGGGCTACAACGCCACCATCACCGCCGACGTGCACGCCGCTCTGACGCTGGCCGGCTCGCTCAACGCCCGCA
ACACGCTGGGCGGCACCGCGCCGAGCCAGGTGCGCGCGCAGATCGAGCGTCACCAAGCCCGCCTCGGCTGA

Protein sequence :
MSTNQLDTKSQAWSALFSEPMSELVKRYTASVFFDKRLWQADIAGSLAHAEMLAAQQIIGAQDLADIQRGMAQITQEIES
GAFEWKLELEDVHLNIEARLTQLVGDAGKRLHTGRSRNDQVATDVRLWLRGEIDATAVLLADMQRALVHVASNNVDVILP
GFTHLQVAQPVSFAHHLLAYVEMFARDAERLADLRKRVNRLPLGSAALAGTSYPLDRERVARTLGFDGVCQNSLDAVSDR
DFAIEFTGFATLVMIHVSRMAEEIVLWMSQNFGFINLSDRYCTGSSIMPQKRNPDVAELARGKSGRVVGHLMGLITLMKG
QPLAYNKDNQEDKEPLFDTVDTVKDTLRIMAEMIGGEVAADGSRSGGLTVKAEAMERAALRGYATATDLADYLVKKGLPF
RDAHEVVAHAVKDAIALGKDLSELPLETLQGYNATITADVHAALTLAGSLNARNTLGGTAPSQVRAQIERHQARLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 4e-134 61
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 4e-134 61