Gene Information

Name : Lcho_3023 (Lcho_3023)
Accession : YP_001792048.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : isochorismatase hydrolase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG1335
EC number : -
Position : 3342377 - 3343078 bp
Length : 702 bp
Strand : -
Note : PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1705 isochorismatase hydrolase

DNA sequence :
ATGAACCGCTACTCCCCAGTCGACGCCAACCCCTACCCCTGGCCCTTCGATGGCGACTGGACCGCGGCCAACACCGCGCT
GGTCATCATCGACATGCAGACCGACTTCTGCGGCGTCGGCGGCTACGTCGACCGCATGGGCTACGACCTGTCGCTGACAC
GTGCGCCGATCGGCCCGATCGCGTCGCTGCTGGCAAAGGCCCGCGCCATCGGCATGCACGTGATCCACACCCGCGAGGGC
CATCGGCCTGATCTGTCGGACTTGCCCGCCAACAAGCGCTGGCGCTCGCGCCGCATCGGCGAGGGCGGCGTGGGCATCGG
CGATCCGGGCCCGTGCGGGCGCATCCTGGTGCGCGGCGAACCCGGCTGGCAGATCATCGAAGAACTTGCGCCCGCGCCTG
GCGAGCCGGTGATCGACAAACCCGGCAAGGGTTCGTTCTGCGCCACCGACCTGGAGCTGATCCTGCACAGCCGCGGCATC
CGCAACCTGATCCTGACCGGCATCACCACCGACGTCTGCGTGCACACCACGATGCGCGAGGCCAACGACCGCGGCTTCGA
GTGCCTGATCGTCAGCGACGGCACGGCAGCCACCGACCGCGGCAACCACGATGCGGCGCTGAAGATGGTGACGATGCAGG
GCGGCGTGTTCGGCGCGGTGGCGTCGTCGGCCGCGATCCTCACCGCTTTGGGAGTGATGTGA

Protein sequence :
MNRYSPVDANPYPWPFDGDWTAANTALVIIDMQTDFCGVGGYVDRMGYDLSLTRAPIGPIASLLAKARAIGMHVIHTREG
HRPDLSDLPANKRWRSRRIGEGGVGIGDPGPCGRILVRGEPGWQIIEELAPAPGEPVIDKPGKGSFCATDLELILHSRGI
RNLILTGITTDVCVHTTMREANDRGFECLIVSDGTAATDRGNHDAALKMVTMQGGVFGAVASSAAILTALGVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2632 YP_859426.1 isochorismatase hydrolase Not tested Not named Protein 3e-33 53