Gene Information

Name : Lcho_3021 (Lcho_3021)
Accession : YP_001792046.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : isochorismatase hydrolase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG1335
EC number : -
Position : 3339890 - 3340588 bp
Length : 699 bp
Strand : -
Note : PFAM: isochorismatase hydrolase; KEGG: scl:sce4416 putative isochorismatase

DNA sequence :
ATGAAACCCATCGTCGACGCCCGTCCGTATCCCTACGCATTCGACCCCGCGCACACGGCAGTCGTGCTGATCGACATGCA
GCGCGATTTCCTGGAGCCCGGCGGCTTCGGCGCGATGCTGGGCAATGACGTGACGACGCTGCAGCGCATCGTGCCGGCCT
GCCAGGCGCTGCTGGCGCTGGCGCGCGCGCACGAGATGCGGGTCATCCACACGCAAGAGGCGCACGACGCGCAGCTGCTC
GACTGCCCGCCGTCCAAGCGCGCGCGCGGCGGCTTGAGCTGCGGCATCGGCGATGTCGGTCCGCTCGGCCGGGTGCTGGT
GGCCGGCGAGCCGGGCGCGGGTTTCGTCGCCGAGCTGCAGCCGCTGCCTGGCGAGACGGTGTTGCGCAAGCCGGGCAAGG
GCGCCTTCCACGCCACCGGGCTCGATGCCATGCTGCGCGCCAGCGGCATCACGCACCTGCTGATCGGCGGCGTCACCACC
GAGGTCTGCGTGCAGACGACGATGCGCGAGGCCAACGACCGCGGCTACGAGTGCCTGCTGGTCGAGGATTGCGCGGCGAG
CTACTTCCCGCACTTTCACGCCGCGGTGGTCGAGATGGTGGTGGCGCAGGGCGGCATCGTCGGCTGGGCGGCGCCGCTGG
CTGCCGTGCAGGATGCGCTGCGGGGCGCCATGCAGGAGGCACGTCCGGCCGCCGCTTAG

Protein sequence :
MKPIVDARPYPYAFDPAHTAVVLIDMQRDFLEPGGFGAMLGNDVTTLQRIVPACQALLALARAHEMRVIHTQEAHDAQLL
DCPPSKRARGGLSCGIGDVGPLGRVLVAGEPGAGFVAELQPLPGETVLRKPGKGAFHATGLDAMLRASGITHLLIGGVTT
EVCVQTTMREANDRGYECLLVEDCAASYFPHFHAAVVEMVVAQGGIVGWAAPLAAVQDALRGAMQEARPAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2632 YP_859426.1 isochorismatase hydrolase Not tested Not named Protein 5e-49 53