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Name : Lcho_3005 (Lcho_3005) Accession : YP_001792030.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 3317961 - 3318941 bp Length : 981 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: bxe:Bxe_B0052 putative transposase DNA sequence : ATGACGCTGGCGAGCATGAAACAGCAGGGGTGCAGCATTCGCGCCATGGCGCGTGCGCTGGGGCGGCCGGCGAGCACGGT CAGTCGCGAACTGCGCCGCAACGTCAGCACTGCGGGCGGGTATGCGAGTGTGCCCGCGCAATCGATGCGCACCGCGCGCC GCCAGGCCAGTCGACCGATGGCCAAACTCGATCCGCGCAGTGTGATGTGGAGCGTCGTGCAGATCCTGCTGGGCTGGAAG TGGTCGCCCCAGCAGATCGCCGCTACGCTCGAGCGCGTGTTCCCCCAAGAGCCCGAACGTCGCGTGTCCCACGAAACCAT CTACACGGCCATCTACGCGCAACCCCGCGGTGAGTTGCGTCGCCAACTCATCGCCTGCCTGCGCCAGGGCCACAGTACAC GCCTGCCACGCACGCGGGGCCAGGATCGGCGCGGCCAGATCCCCGAGATGGTGAGCATCCACGTGCGTCCGCCTGAGGTC GAGGATCGACTCCTGCCCGGTCACTGGGAGGGCGACCTCATCAAGGGCGCGGGCAATCAGTCCTCGGTGGGCGTGCTCGT AGAGCGCACCAGCCGTCTGGTCTTGCTGGCCAAGATGGACGATGCGACGGCCGCTTCAGCGCTGGCGGGCTTTGCTGCCA AGCTCAATTCGATCACCGCGCCGATGCGCCAGAGTCTGACCTACGACCAGGGCCGGGAGATGAGCCGCCACCAGGCGTTG GCCGCCGCGACCGGCGTGAAGGTCTACTTCTGTGATCCGCACAGCCCCTGGCAGCGCGGCACCTGCGAGAACACCAACGG GCTGCTGCGCCAGTACCTGCCCAAGGGCACCGATCTGTCGGTCCATACGCAGGATGCGCTTGATGCCATTGCTGACAGCC TCAACAACCGGCCCCGCGCGACGCACAACTTCCATTCGCCCCTGGAGGTATTCGCAGCCGTGTTGAAAAAGCTCGATCAA CCCGATTCTTCTATTCATTGA Protein sequence : MTLASMKQQGCSIRAMARALGRPASTVSRELRRNVSTAGGYASVPAQSMRTARRQASRPMAKLDPRSVMWSVVQILLGWK WSPQQIAATLERVFPQEPERRVSHETIYTAIYAQPRGELRRQLIACLRQGHSTRLPRTRGQDRRGQIPEMVSIHVRPPEV EDRLLPGHWEGDLIKGAGNQSSVGVLVERTSRLVLLAKMDDATAASALAGFAAKLNSITAPMRQSLTYDQGREMSRHQAL AAATGVKVYFCDPHSPWQRGTCENTNGLLRQYLPKGTDLSVHTQDALDAIADSLNNRPRATHNFHSPLEVFAAVLKKLDQ PDSSIH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC39292.1 | - | Not tested | LPA | Protein | 1e-45 | 43 |
