Gene Information

Name : Lcho_2887 (Lcho_2887)
Accession : YP_001791917.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1686
EC number : -
Position : 3179917 - 3180888 bp
Length : 972 bp
Strand : -
Note : PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: mpt:Mpe_A2100 serine-type D-Ala-D-Ala carboxypeptidase

DNA sequence : 
ATGGCTGCGGAGCGCGTGGGGAAGAAACGCGTCAAGGCCGCCAAGATCGTCAAGATCGCCAAGGCGTCCAAGTCGGCGAA
GGTCATTCCGCGGCGCAGTGTCGTGCGTGCACGTGCCATCGTGGACGCCCCGGTCAGGGCGTCTTTCGGACAGGGTTTCG
GCTTGCACCTGACCGAGGATGCGCTCGACCTGAAATCCAGCGTCGCGTTCGTGATCGATCAGGAAACCTCCGAAGTCCTG
TTCAGCAAGAACCCGCAGGCCGTCCTGCCCATCGCATCGCTGACCAAGTTGATGACGGCCCTGGTGGTCGTCGAGGCCGG
TCAGCCGCTGGACGAGATCCTCGAAGTCAGCGAGGCCGACGTCGACACTGAAAAATTCAGTCGATCGCGCTTGGCCGTGG
GGACCCGTCTGACCCGTGAAGACATGCTGCACCTGGCATTGATGTCATCCGAGAACCGTGCCGCCCACGCGCTCGGACGG
CATTTTCCGGGTGGCCTCAATGCGTTTGTCGACGCGATGAACTTCAAGGCCGCTTCGCTGGGCATGGCCGATACGCACTA
CGTCGAGCCGACCGGCCTGTCGAGTCGCAACCAGGCCAGCGCGCCTGATCTGGCACGTCTCGTCAAGGCTGCCTACGCCT
ACCCGCTGCTTCGTGATTTCTCGACCACGCCCGAGGCCGAGGTCGAAGTCGGGCGGCGCACGATGCAGTTCCGCAACACC
AATGGCCTGATCCGCAATCCGACCTGGGACATCGGGCTGCAGAAAACCGGCTACATCGTCGAAGCCGGTCGTTGCCTGGT
CATGCAGGCGAAGTTTGCCGGTCGCCAGCTGATCATGGTGTTCCTGGATTCAACCGGCAAGTACTCGCGTCTTGGCGATG
CCGAGCGGGTGCGCCGCTGGCTCGAGAGCGACACCGGGATCGCCACCGCTGCACACCCGACTGCCAGCCCCCGTGTGCGC
ACCGCGCATTGA

Protein sequence : 
MAAERVGKKRVKAAKIVKIAKASKSAKVIPRRSVVRARAIVDAPVRASFGQGFGLHLTEDALDLKSSVAFVIDQETSEVL
FSKNPQAVLPIASLTKLMTALVVVEAGQPLDEILEVSEADVDTEKFSRSRLAVGTRLTREDMLHLALMSSENRAAHALGR
HFPGGLNAFVDAMNFKAASLGMADTHYVEPTGLSSRNQASAPDLARLVKAAYAYPLLRDFSTTPEAEVEVGRRTMQFRNT
NGLIRNPTWDIGLQKTGYIVEAGRCLVMQAKFAGRQLIMVFLDSTGKYSRLGDAERVRRWLESDTGIATAAHPTASPRVR
TAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00303 YP_008207768.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR25 Protein 9e-47 47
BJAB0868_00307 YP_008211633.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR26 Protein 9e-47 47