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Name : Lcho_2826 (Lcho_2826) Accession : YP_001791856.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 3113110 - 3114531 bp Length : 1422 bp Strand : - Note : KEGG: mpt:Mpe_A1530 putative replicative DNA helicase protein; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase DNA sequence : ATGTCTGCTCAGCTGTCAGGATCCCCCTACCCGCCACGAGGCGCCGATGACGAAGTCGCCCGCCTGCGCATCCCGCCTCA TTCGGTCGAGGCCGAACAGAGCGTGCTCGGTGGCCTGCTGATCGACAACTCGGCGTCCGACCGGGCGGGCGACCTGCTGA CCGAGAGCGATTTCTACCGCTTCGAACACAAGCTGATCTACGGCGCCATGATGGCGCTGATCTCGGCCAACAAGCCGGCC GACGTCATCACGGTCTTCGAGCAGCTCAAGAGCCTGGGCAAGGCTGAAGAGGTGGGGGGGTTGGCCTACCTCAACGCGCT GGCGCAGAGCGTGCCGAGTGCGGCCAACCTGCGGCGATACGCCGAAATCGTGCGTGAGCGCGCCATCCTGCGCAAGCTGG TTGCCGCCAGCGACGAGATCGCCACCAACGCGTTCAATCCGCAGGGGCGTGGCGTTGCCTCGATCCTCGACGAGGCGGAA ACCCGGATTTTCCAGATCGGCGAAGAGGGCTCGCGCAACAAGCAGGGCTTTCATTCGATGGACACGCTGGTGGTTCAGCT GATCGACCGGGTCCAGGAGCTGGCTGAAAACGGCGCTGGAGAAGTCACCGGGGTTCCGACCGGTTTTGCCGATCTGGACC GCATGACGTCCGGGCTGCAGCCCGGCGACCTGATCGTGCTGGCGGCACGGCCTTCGATGGGCAAGACCGCCTTTGCGCTC AACATCGGCGAGCACGTGGCGGTGAAGGAACAGCTGCCGGTGGTCGTGTTCTCAATGGAAATGGGCGCCTCGCAACTGGC GCTGCGGATGGTGGGCTCGCTCGGGCGCATCGACCAGCAGCACCTGCGCACCGGCTCGCTGCGTGACGATGAATGGGGGC GGTTGTCCGAGGCGGTCGACCAGTTGCGCAATGTCAGCCTCTTCATCGACGAGACCCCGGCGCTCACGCCGGCCGAACTG CGTGCGCGCTCGCGGCGCCAGGCCCGCCAGTGCGGCAAGCTCGGACTGATCATCGTCGACTACCTGCAGCTGATGAGCGG CTCGAACAGTGGCGGCGGCGAGAACCGCACGGCCGAGATCAGCGAGATCTCGCGCGGACTGAAGGCGCTGGCCAAGGAGC TGCAGTGTCCGGTGATCGCGCTGTCGCAGCTCAATCGCTCGGTCGAGACGCGCACCGACAAGCGGCCGATGATGAGCGAC CTGCGCGAGTCGGGCGCCATCGAGCAGGACGCCGACGTCATCATGTTCATCTACCGCGACGAGTACTACAACAAGGAGTC GAAGGAGCCCGGCGTGGCCGAGATCATCATCGGCAAGCAGCGTAACGGGCCCGTGGGCACGGTGCGGCTGGCGTTCCTGC GGCCGCTGACCAAGTTCGAGAACCTGGCGCCGGGCAGCTTCGGCGGCGGCAGCGAGTACTGA Protein sequence : MSAQLSGSPYPPRGADDEVARLRIPPHSVEAEQSVLGGLLIDNSASDRAGDLLTESDFYRFEHKLIYGAMMALISANKPA DVITVFEQLKSLGKAEEVGGLAYLNALAQSVPSAANLRRYAEIVRERAILRKLVAASDEIATNAFNPQGRGVASILDEAE TRIFQIGEEGSRNKQGFHSMDTLVVQLIDRVQELAENGAGEVTGVPTGFADLDRMTSGLQPGDLIVLAARPSMGKTAFAL NIGEHVAVKEQLPVVVFSMEMGASQLALRMVGSLGRIDQQHLRTGSLRDDEWGRLSEAVDQLRNVSLFIDETPALTPAEL RARSRRQARQCGKLGLIIVDYLQLMSGSNSGGGENRTAEISEISRGLKALAKELQCPVIALSQLNRSVETRTDKRPMMSD LRESGAIEQDADVIMFIYRDEYYNKESKEPGVAEIIIGKQRNGPVGTVRLAFLRPLTKFENLAPGSFGGGSEY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 4e-100 | 50 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-91 | 49 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-91 | 49 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-84 | 48 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 5e-89 | 47 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-82 | 47 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-82 | 47 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-85 | 45 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 2e-72 | 43 |
