Gene Information

Name : Lcho_2662 (Lcho_2662)
Accession : YP_001791692.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2922598 - 2923395 bp
Length : 798 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A2305 ferric-citrate ABC transporter ATPase

DNA sequence : 
ATGATGCGTGCGACGACGGCAACGACGCCCGCCGTGTCATGCCGCGCCCTCGGGGTGCCGCTGGGCGAAGGCGCTGCGCG
CCGCGAGGTGCTGCGCGGCGTCGACCTCGAATTTGCCGCCACCGGCTGGACCGCCGTCGTCGGCCCCAACGGCGCCGGCA
AGTCGACGCTGTTGCGCTGCCTGGCCGGCCTGCTGCCGACCTTCACCGGCGAGGTCCGACTGCAGGGCCGACCGATTTCA
GACTGGCCGCTGCGCGAGCGCGCCCGGCGCCTGGCCTGGCTGGCGCAGCAGGGCGAAGCCTCGGGCGAGCTGACGGTGCG
CGACGTGGTGCACCTCGGCCGCCTGCCGCATCTGGGCCTGCTCGGTCGACCGAACGCGCACGACGAGGCGATCGTGCAGC
AGGCGATGGCCGACACCGAATGCGCCGACTGGCAGCACCGGCGCCTGACCGAGCTCTCCGGCGGCGAGCGCCAGCGCGTG
CTGCTGGCGCGGGCGCTGGCGGTGGATGCGCCGGTGCTGCTGCTCGACGAGCCGACCACCCACCTCGACGCGCCGCATCA
GGTGGCGCTGGTGCGCCTGCTCAAGCGGCGCTCGCGCGAGGACTGCGTCATCAGCGTGCTGCACGACCTGCCGCTGGCGC
TGGCCGCCGACCGCCTGGTGGTGCTGGCGCAGGGCCGCGTGCGGGCGCAGGGCCGGTCCGACGATCCGGCCGTGCACGCC
GAGCTGGAGGCGGTGTTCGGCGGCGCGATCCGCATCCTGTCGGTCGACGGCCGCTGGGTCGCCGTGCCGCACCTTTGA

Protein sequence : 
MMRATTATTPAVSCRALGVPLGEGAARREVLRGVDLEFAATGWTAVVGPNGAGKSTLLRCLAGLLPTFTGEVRLQGRPIS
DWPLRERARRLAWLAQQGEASGELTVRDVVHLGRLPHLGLLGRPNAHDEAIVQQAMADTECADWQHRRLTELSGGERQRV
LLARALAVDAPVLLLDEPTTHLDAPHQVALVRLLKRRSREDCVISVLHDLPLALAADRLVVLAQGRVRAQGRSDDPAVHA
ELEAVFGGAIRILSVDGRWVAVPHL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-12 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lcho_2662 YP_001791692.1 ABC transporter-like protein BAC0164 Protein 4e-12 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lcho_2662 YP_001791692.1 ABC transporter-like protein VFG1042 Protein 4e-12 47