Gene Information

Name : Lcho_2490 (Lcho_2490)
Accession : YP_001791520.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : 3-oxoacid CoA-transferase subunit A
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1788
EC number : 2.8.3.8
Position : 2713824 - 2714486 bp
Length : 663 bp
Strand : +
Note : KEGG: rru:Rru_A1472 acetate CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase

DNA sequence :
TTGAGCAAGACCATCAAGGCGGCAGACGCCGTGGCCCGCATCCCCGACGGGGCGGTGCTGATGATCGGCGGCTTCATGGG
CGTGGGCACCCCCCATCGCCTGGTCGACGAACTGGTGCGCCAGGGCAAGCGCGACCTGACCGTGATCGCCAACGACACCG
CGCGCCCCGGCGTCGGCATCGGCAAACTGATCAGCGCCGGGCTGGTGAAGCGGGCGATCGTCAGCCACATCGGCACCAAC
CCCGAGACCCAGGCGCAGATGATCGCCGGCAAGCTCGAGGTCGACCTGGTGCCCCAGGGCACGCTGGCCGAGCGCGTGCG
CGCCGGCGGCTACGGGCTGGGCGGCGTGCTCACGCCCACCGGCGTGGGCACGGTGGTGGCCGACGGCAAGCGCACGCTCG
AGATCGAGGGCCGCCTGTTCCTGCTGGAGCTGCCGCTGCGGGCCGATTTCGCGCTCGTCAACGCCCGCCAGGCCGACCAC
ATCGGCAACCTCGCCTACGCGCTGACGGCGCGCAACTTCAACCCGCTGATCGCGATGGCCGCCGACGTCGTGCTGGCCGA
GCCGCAGGAGATCGTGCCGGTCGGCGTGATCCCGCCCGACGCCGTCATGACGCCGTCGGTGGTCGTCACCCACATCATCG
CCAAGGAGTCCGCACATGGATGA

Protein sequence :
MSKTIKAADAVARIPDGAVLMIGGFMGVGTPHRLVDELVRQGKRDLTVIANDTARPGVGIGKLISAGLVKRAIVSHIGTN
PETQAQMIAGKLEVDLVPQGTLAERVRAGGYGLGGVLTPTGVGTVVADGKRTLEIEGRLFLLELPLRADFALVNARQADH
IGNLAYALTARNFNPLIAMAADVVLAEPQEIVPVGVIPPDAVMTPSVVVTHIIAKESAHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 1e-44 58