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Name : Lcho_2430 (Lcho_2430) Accession : YP_001791460.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2638559 - 2640445 bp Length : 1887 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAATGCCCCCGACAAGCTGCAAGACCTGCTCTCGCTGACCCGCGAACCCTTCCCCGCCTCGCGCAAGGTCTACGCCGA GGGCTCCGAGGGCGTGCGCGTGCCGATGCGCGAGATCGCGCTGACCAACGGCGAGCGCGTCACGGTCTACGACACCTCCG GCCCCTACACCGATCCGCTCGCGACGATCGACGCCAAGCTCGGCCTGCCGAGCGTGCGCACCGGCTGGATCGAGGCCCGC GGCGACACCGAGACCTACGCCGGCCGCAACCGCGTGGCGCTGGACGACGGCGGCAAGCACGAGGAAACGGCGCGCATCGA AGCCCTGCGCGCCCAGGCCGCCGCGCTGCAGCGCACGCCGCGCCGCGCCAAGGCTGGCGGCAACGTGACGCAGATGCACT ACGCCCGCCGCGGCATCGTCACGCCCGAGATGGAGTACGTGGCGATCCGCGAAAACGGCAAGCGCGAATGGATGCGCGAG TACCTGGGCGACGCCGAGCGCGAGGCCCGCCTGGCCGGCAATGCCAAGGGCGCGCGCATCCCCGAGATCTACACGCCCGA GTTCGTGCGCGACGAGGTGGCGCGCGGGCGCGCGATCATCCCGGCCAACATCAACCACCCCGAGGTGGAACCGATGGCGA TCGGGCGCAACTTCGGCGTCAAGATCAACGCCAACATCGGCAACTCGGCGGTGACGTCGAGCATCGAGGAAGAAGTCGAG AAACTCGTGTGGGCGATCCGCTGGGGCGCCGACAACGTGATGGACCTGTCGACCGGCCGCAACATCCACACCACGCGCGA CTGGATCGTGCGCAACAGCCCCGTGCCCATCGGCACCGTGCCGATCTACCAGGCGCTCGAGAAGGTCGGCGGCATCGCCG AAGACCTGACCTGGGCGATCTACCGCGACACGCTGATCGAGCAGGCCGAACAGGGCGTCGACTACTTCACCATCCACGCG GGGGTGCGCCTGCCGTTCATCCACCTGACGGCGAATCGGCGCACCGGCATCGTCTCGCGCGGCGGCTCGATCCTGGCCAA GTGGTGCATCACGCATCACAAGGAAAACTTCCTGTACACGCACTTCGAAGAGATCTGCGAAATCATGAAGGCCTACGACG TCAGCTTCTCGCTCGGCGACGGCCTGCGTCCGGGCTCGGCGTCCGACGCCAACGACGCGGCGCAGTTCGCCGAGCTGAAG ACGCTGGGCGAGCTGACGCAGGTGGCCTGGAAACACGACGTACAGACCATGATCGAAGGCCCCGGCCACGTGCCGATGCA CCTGATCCAGGCCAACATGGACGAGCAGATCAAGCACTGCCACGAGGCGCCGTTCTACACGCTCGGGCCCTTGACGATCG ACATCGCACCCGGCTACGACCACATTGCGTCAGCGATCGGCGCAGCCATGATCGGCTGGATGGGCACGGCGATGCTGTGC TACGTGACGCCCAAGGAGCACCTCGGCCTGCCCGACCGCGACGACGTCAAGCAGGGCATCATTGCCTACAAGATCGCCGC GCACGCGGCCGACATCGCCAAGGGCCACCCGGGTGCACGGGCCCGTGACGACGCGATGAGCAAGGCGCGCTTCGAGTTCC GCTGGCACGACCAGTTCAACCTCGGCCTCGACCCCGACACGGCGCGCGACTATCACGACGAGACGCTGCCGAAGGACTCC AGCAAGGAAGCGCATTTCTGCAGCATGTGCGGGCCGAAGTTCTGCTCGATGAAGATCACGCAGGACGTGCGCGACTACGC CGCGGCCAAGGGCTTGAGCGAGGAGCAGGCGCTGGCCGACGTCGAACAAGGCATGGCGGCCAAGTCGGCCGAGTTCAAGG CGCAGGGCGGCGAGCTCTACATCCCGATCACGCCGGTGCAGGCCTGA Protein sequence : MNAPDKLQDLLSLTREPFPASRKVYAEGSEGVRVPMREIALTNGERVTVYDTSGPYTDPLATIDAKLGLPSVRTGWIEAR GDTETYAGRNRVALDDGGKHEETARIEALRAQAAALQRTPRRAKAGGNVTQMHYARRGIVTPEMEYVAIRENGKREWMRE YLGDAEREARLAGNAKGARIPEIYTPEFVRDEVARGRAIIPANINHPEVEPMAIGRNFGVKINANIGNSAVTSSIEEEVE KLVWAIRWGADNVMDLSTGRNIHTTRDWIVRNSPVPIGTVPIYQALEKVGGIAEDLTWAIYRDTLIEQAEQGVDYFTIHA GVRLPFIHLTANRRTGIVSRGGSILAKWCITHHKENFLYTHFEEICEIMKAYDVSFSLGDGLRPGSASDANDAAQFAELK TLGELTQVAWKHDVQTMIEGPGHVPMHLIQANMDEQIKHCHEAPFYTLGPLTIDIAPGYDHIASAIGAAMIGWMGTAMLC YVTPKEHLGLPDRDDVKQGIIAYKIAAHAADIAKGHPGARARDDAMSKARFEFRWHDQFNLGLDPDTARDYHDETLPKDS SKEAHFCSMCGPKFCSMKITQDVRDYAAAKGLSEEQALADVEQGMAAKSAEFKAQGGELYIPITPVQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 68 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 68 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 4e-179 | 65 |
