Gene Information

Name : Lcho_2155 (Lcho_2155)
Accession : YP_001791186.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4136
EC number : -
Position : 2358096 - 2358740 bp
Length : 645 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsh:Rsph17029_1834 ABC transporter related

DNA sequence :
TTGACATTGCCACTCCACCTCGACAACGTGCAGATCCGGCTCGGCGAGCGCGTGCTGCTCGGCCCGATCGGCGCCCGGAT
CGAGCCCGGCGAGTGCCTGACGGTGATGGGCCCGAGCGGCTGCGGCAAGTCGACCTTGCTGGCCTTCGTGGCCGGCACGC
TCGACCCGGCGTTCAGCGCGAGCGGGCACGTGCGCATCGGCGCGCACGACCTGACCGGCGTGCCGCCCGAGCGGCGCCGC
ATCGGCATCCTGTTCCAGGACGACCTGCTGTTTCCGCACCTGTCGGTGGCCGGCAATCTCGGTTTTGCGCTGCCGGCCGA
GGTGCGGCCCAAGGCCGTGCGGCGCCGGCGCATCGAGCAGGCGCTGGCCGACGCCGGCCTGGCCGGGTTTGCCGATCGCG
ACCCGGCGACGCTGTCGGGCGGCCAGCGCGCCCGCGTCGCGCTGCTGCGCAGCCTGCTCGCCGAGCCCGCCGCACTGCTG
CTCGACGAACCGTTCGGCAAGCTCGATGCGCAGCTGCGCGACGATTTCCGGCGCTTCGTCTTCGATCACGTGCGCGCGAG
CGGTCTGCCGACCCTGCTCGTCAGCCACGACGCCGCCGATGCCGCTGCCGCAGGCGCGGCGGTGATCCAATTGCCTCAGA
CATGA

Protein sequence :
MTLPLHLDNVQIRLGERVLLGPIGARIEPGECLTVMGPSGCGKSTLLAFVAGTLDPAFSASGHVRIGAHDLTGVPPERRR
IGILFQDDLLFPHLSVAGNLGFALPAEVRPKAVRRRRIEQALADAGLAGFADRDPATLSGGQRARVALLRSLLAEPAALL
LDEPFGKLDAQLRDDFRRFVFDHVRASGLPTLLVSHDAADAAAAGAAVIQLPQT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-08 41